PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Csimscaffold16850133170 Alkaloid T3O medium borderline
Csimscaffold1690133980 Alkaloid T3O medium pass
Csimscaffold1690134000 Alkaloid T3O medium pass
Csimscaffold17290139800 Alkaloid T3O medium pass
Csimscaffold17750145330 Alkaloid T3O medium borderline
Csimscaffold17750145360 Alkaloid T3O medium borderline
Csimscaffold1800149570 Alkaloid T3O medium borderline
Csimscaffold1820152320 Alkaloid T3O medium pass
Csimscaffold18230152840 Alkaloid T3O medium borderline
Csimscaffold1830153920 Alkaloid T3O medium borderline
Csimscaffold18780159370 Alkaloid T3O medium borderline
Csimscaffold18780159380 Alkaloid T3O medium borderline
Csimscaffold1900163260 Alkaloid T3O low borderline
Csimscaffold19600170260 Alkaloid T3O medium borderline
Csimscaffold19830172930 Alkaloid T3O medium borderline
Csimscaffold2040181740 Alkaloid T3O medium borderline
Csimscaffold2040181770 Alkaloid T3O medium borderline
Csimscaffold20480182940 Alkaloid T3O medium pass
Csimscaffold21130192850 Alkaloid T3O medium borderline
Csimscaffold21130192890 Alkaloid T3O medium borderline
Csimscaffold21610197630 Alkaloid T3O medium borderline
Csimscaffold21760198930 Alkaloid T3O medium borderline
Csimscaffold21760198940 Alkaloid T3O medium borderline
Csimscaffold2200202010 Alkaloid T3O medium pass
Csimscaffold2200202020 Alkaloid T3O medium pass
Csimscaffold2240205950 Alkaloid T3O low borderline
Csimscaffold22530207470 Alkaloid T3O medium borderline
Csimscaffold2270208790 Alkaloid T3O low borderline
Csimscaffold2280209860 Alkaloid T3O medium borderline
Csimscaffold23700220060 Alkaloid T3O medium borderline
Csimscaffold2380221010 Alkaloid T3O medium borderline
Csimscaffold2400223800 Alkaloid T3O medium borderline
Csimscaffold24120225100 Alkaloid T3O medium pass
Csimscaffold2500233300 Alkaloid T3O medium borderline
Csimscaffold2500233310 Alkaloid T3O medium borderline
Csimscaffold2500233320 Alkaloid T3O medium borderline
Csimscaffold25230235320 Alkaloid T3O low borderline
Csimscaffold2750256690 Alkaloid T3O medium borderline
Csimscaffold27940259690 Alkaloid T3O medium borderline
Csimscaffold280259940 Alkaloid T3O medium borderline
Csimscaffold28560265050 Alkaloid T3O low borderline
Csimscaffold28930267520 Alkaloid T3O medium borderline
Csimscaffold28930267540 Alkaloid T3O medium borderline
Csimscaffold29610273130 Alkaloid T3O medium borderline
Csimscaffold3000277490 Alkaloid T3O medium borderline
Csimscaffold31040284680 Alkaloid T3O medium borderline
Csimscaffold31510287380 Alkaloid T3O medium borderline
Csimscaffold31510287390 Alkaloid T3O medium borderline
Csimscaffold31710288620 Alkaloid T3O medium borderline
Csimscaffold3180289020 Alkaloid T3O medium borderline