PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Csimscaffold16670130730 Flavonoid UFGT high pass
Csimscaffold16940134590 Flavonoid UFGT medium pass
Csimscaffold16940134600 Flavonoid UFGT high pass
Csimscaffold170135440 Flavonoid UFGT high pass
Csimscaffold170135460 Flavonoid UFGT medium pass
Csimscaffold170135490 Flavonoid UFGT medium pass
Csimscaffold17040136680 Flavonoid UFGT high pass
Csimscaffold17090137090 Flavonoid UFGT medium pass
Csimscaffold17090137100 Flavonoid UFGT high pass
Csimscaffold17790145780 Flavonoid UFGT high pass
Csimscaffold180148990 Flavonoid UFGT high pass
Csimscaffold1820152450 Flavonoid UFGT high pass
Csimscaffold1820152470 Flavonoid UFGT high pass
Csimscaffold18630157850 Flavonoid UFGT high pass
Csimscaffold18730159000 Flavonoid UFGT medium pass
Csimscaffold18730159010 Flavonoid UFGT medium pass
Csimscaffold18820160040 Flavonoid UFGT high pass
Csimscaffold190162840 Flavonoid UFGT low borderline
Csimscaffold190162910 Flavonoid UFGT medium pass
Csimscaffold19030163640 Flavonoid UFGT high pass
Csimscaffold19030163650 Flavonoid UFGT high pass
Csimscaffold19810172820 Flavonoid UFGT medium pass
Csimscaffold20000176370 Flavonoid UFGT low borderline
Csimscaffold20000176390 Flavonoid UFGT medium pass
Csimscaffold20100177950 Flavonoid UFGT medium pass
Csimscaffold20100177960 Flavonoid UFGT medium pass
Csimscaffold2010177670 Flavonoid UFGT high pass
Csimscaffold2010177690 Flavonoid UFGT high pass
Csimscaffold20720186920 Flavonoid UFGT low borderline
Csimscaffold210190750 Flavonoid UFGT medium pass
Csimscaffold210190770 Flavonoid UFGT medium pass
Csimscaffold210190780 Flavonoid UFGT high pass
Csimscaffold21290194400 Flavonoid UFGT medium pass
Csimscaffold21750198890 Flavonoid UFGT medium pass
Csimscaffold21750198900 Flavonoid UFGT medium pass
Csimscaffold21780199090 Flavonoid UFGT high pass
Csimscaffold21980200840 Flavonoid UFGT high pass
Csimscaffold22100203050 Flavonoid UFGT low borderline
Csimscaffold22100203080 Flavonoid UFGT medium pass
Csimscaffold22140203200 Flavonoid UFGT high pass
Csimscaffold22140203230 Flavonoid UFGT medium pass
Csimscaffold2250207160 Flavonoid UFGT low borderline
Csimscaffold2260207800 Flavonoid UFGT medium pass
Csimscaffold2260207820 Flavonoid UFGT medium pass
Csimscaffold22860210350 Flavonoid UFGT medium pass
Csimscaffold2320214850 Flavonoid UFGT high pass
Csimscaffold23280215730 Flavonoid UFGT high pass
Csimscaffold23280215740 Flavonoid UFGT high pass
Csimscaffold23280215750 Flavonoid UFGT high pass
Csimscaffold23370216590 Flavonoid UFGT medium pass