PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold2400223880 Flavonoid UFGT low borderline
Csimscaffold2400223890 Flavonoid UFGT high pass
Csimscaffold2530235510 Flavonoid UFGT medium pass
Csimscaffold26600247970 Flavonoid UFGT medium pass
Csimscaffold2740255600 Flavonoid UFGT high pass
Csimscaffold28080261720 Flavonoid UFGT low borderline
Csimscaffold28210262840 Flavonoid UFGT medium pass
Csimscaffold2840263900 Flavonoid UFGT high pass
Csimscaffold2840263910 Flavonoid UFGT high pass
Csimscaffold2840263920 Flavonoid UFGT high pass
Csimscaffold2840263950 Flavonoid UFGT medium pass
Csimscaffold2840263970 Flavonoid UFGT medium pass
Csimscaffold29670273280 Flavonoid UFGT medium pass
Csimscaffold29670273290 Flavonoid UFGT medium pass
Csimscaffold30260279120 Flavonoid UFGT high pass
Csimscaffold30260279140 Flavonoid UFGT medium pass
Csimscaffold31360286490 Flavonoid UFGT high pass
Csimscaffold33330298920 Flavonoid UFGT medium pass
Csimscaffold33710301240 Flavonoid UFGT medium pass
Csimscaffold33820301860 Flavonoid UFGT high pass
Csimscaffold3470306440 Flavonoid UFGT medium pass
Csimscaffold34870307220 Flavonoid UFGT medium pass
Csimscaffold34870307230 Flavonoid UFGT medium pass
Csimscaffold35020309060 Flavonoid UFGT medium pass
Csimscaffold3540310720 Flavonoid UFGT medium pass
Csimscaffold36370315810 Flavonoid UFGT medium pass
Csimscaffold3670317330 Flavonoid UFGT medium pass
Csimscaffold38220324740 Flavonoid UFGT high pass
Csimscaffold3950330990 Flavonoid UFGT medium pass
Csimscaffold40333760 Flavonoid UFGT high pass
Csimscaffold40333770 Flavonoid UFGT low borderline
Csimscaffold40333790 Flavonoid UFGT high pass
Csimscaffold40333800 Flavonoid UFGT medium pass
Csimscaffold40333810 Flavonoid UFGT high pass
Csimscaffold40333840 Flavonoid UFGT medium pass
Csimscaffold4210344960 Flavonoid UFGT medium pass
Csimscaffold4270347110 Flavonoid UFGT medium pass
Csimscaffold42850347520 Flavonoid UFGT low borderline
Csimscaffold430348500 Flavonoid UFGT high pass
Csimscaffold430348520 Flavonoid UFGT high pass
Csimscaffold4330349900 Flavonoid UFGT medium pass
Csimscaffold4330349910 Flavonoid UFGT high pass
Csimscaffold4330349940 Flavonoid UFGT high pass
Csimscaffold4330349950 Flavonoid UFGT high pass
Csimscaffold440353260 Flavonoid UFGT high pass
Csimscaffold4530358420 Flavonoid UFGT high pass
Csimscaffold4530358440 Flavonoid UFGT high pass
Csimscaffold4530358460 Flavonoid UFGT medium pass
Csimscaffold4530358480 Flavonoid UFGT high pass
Csimscaffold4600361390 Flavonoid UFGT medium pass