PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold4600361400 Flavonoid UFGT high pass
Csimscaffold4700364510 Flavonoid UFGT high pass
Csimscaffold4700364530 Flavonoid UFGT medium pass
Csimscaffold4700364560 Flavonoid UFGT high pass
Csimscaffold480367680 Flavonoid UFGT medium pass
Csimscaffold480367690 Flavonoid UFGT medium pass
Csimscaffold4890370570 Flavonoid UFGT low borderline
Csimscaffold4910371630 Flavonoid UFGT high pass
Csimscaffold4910371650 Flavonoid UFGT high pass
Csimscaffold4910371670 Flavonoid UFGT high pass
Csimscaffold4910371690 Flavonoid UFGT high pass
Csimscaffold4930372220 Flavonoid UFGT high pass
Csimscaffold4940372430 Flavonoid UFGT low borderline
Csimscaffold4950372640 Flavonoid UFGT medium pass
Csimscaffold5080377650 Flavonoid UFGT medium pass
Csimscaffold5080377660 Flavonoid UFGT medium pass
Csimscaffold540388390 Flavonoid UFGT low borderline
Csimscaffold540388420 Flavonoid UFGT high pass
Csimscaffold540388450 Flavonoid UFGT medium pass
Csimscaffold540388460 Flavonoid UFGT high pass
Csimscaffold5580393430 Flavonoid UFGT low borderline
Csimscaffold5690396220 Flavonoid UFGT high pass
Csimscaffold6280413910 Flavonoid UFGT medium pass
Csimscaffold630414700 Flavonoid UFGT high pass
Csimscaffold630414730 Flavonoid UFGT high pass
Csimscaffold630414740 Flavonoid UFGT high pass
Csimscaffold630414770 Flavonoid UFGT low borderline
Csimscaffold630414790 Flavonoid UFGT medium pass
Csimscaffold6410417660 Flavonoid UFGT low borderline
Csimscaffold6480419370 Flavonoid UFGT high pass
Csimscaffold6480419380 Flavonoid UFGT high pass
Csimscaffold6530421120 Flavonoid UFGT medium pass
Csimscaffold6530421130 Flavonoid UFGT medium pass
Csimscaffold6530421140 Flavonoid UFGT medium pass
Csimscaffold660422920 Flavonoid UFGT high pass
Csimscaffold670425600 Flavonoid UFGT high pass
Csimscaffold690432120 Flavonoid UFGT high pass
Csimscaffold690432140 Flavonoid UFGT medium pass
Csimscaffold690432160 Flavonoid UFGT medium pass
Csimscaffold690432180 Flavonoid UFGT medium pass
Csimscaffold690432200 Flavonoid UFGT medium pass
Csimscaffold7070437940 Flavonoid UFGT medium pass
Csimscaffold7110439130 Flavonoid UFGT low borderline
Csimscaffold7130439600 Flavonoid UFGT medium pass
Csimscaffold730443940 Flavonoid UFGT medium pass
Csimscaffold730443960 Flavonoid UFGT high pass
Csimscaffold730443990 Flavonoid UFGT low borderline
Csimscaffold7330445160 Flavonoid UFGT high pass
Csimscaffold7330445170 Flavonoid UFGT medium pass
Csimscaffold7370446100 Flavonoid UFGT low borderline