PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold7170440450 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold7440447770 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold7700454800 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold7700454820 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold8120466040 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold8120466050 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold8120466060 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold8190467650 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold8420473020 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold8420473040 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold8420473060 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold8450473490 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold9180493010 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold9240494910 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold9250495260 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold9620503760 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold9620503770 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold4650362810 Steroid SQE medium pass
Csimscaffold5290384300 Steroid SQE medium pass
Csimscaffold6140410200 Steroid SQE low borderline
Csimscaffold6140410240 Steroid SQE low borderline
Csimscaffold11770040680 Steroid SQS/FDFT1 medium pass
Csimscaffold12550056900 Steroid SQS/FDFT1 low borderline
Csimscaffold16550129120 Steroid SQS/FDFT1 medium pass
Csimscaffold2010177620 Steroid SQS/FDFT1 high pass
Csimscaffold2180199190 Steroid SQS/FDFT1 medium pass
Csimscaffold230211520 Steroid SQS/FDFT1 medium pass
Csimscaffold25290235500 Steroid SQS/FDFT1 low borderline
Csimscaffold2640245980 Steroid SQS/FDFT1 low borderline
Csimscaffold3320298270 Steroid SQS/FDFT1 medium pass
Csimscaffold33430299500 Steroid SQS/FDFT1 medium pass
Csimscaffold3740320830 Steroid SQS/FDFT1 low borderline
Csimscaffold41050340160 Steroid SQS/FDFT1 low borderline
Csimscaffold41500342180 Steroid SQS/FDFT1 medium pass
Csimscaffold5920403380 Steroid SQS/FDFT1 low borderline