PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold2690250200 Phenylpropanoid COMT medium pass
Csimscaffold2740255980 Phenylpropanoid COMT medium pass
Csimscaffold28270263080 Phenylpropanoid COMT medium pass
Csimscaffold28390263830 Phenylpropanoid COMT low borderline
Csimscaffold2900268540 Phenylpropanoid COMT medium pass
Csimscaffold2900268550 Phenylpropanoid COMT medium pass
Csimscaffold2900268560 Phenylpropanoid COMT medium pass
Csimscaffold2900268590 Phenylpropanoid COMT medium pass
Csimscaffold3130285980 Phenylpropanoid COMT low borderline
Csimscaffold31440286930 Phenylpropanoid COMT medium pass
Csimscaffold31530287430 Phenylpropanoid COMT medium pass
Csimscaffold32380293010 Phenylpropanoid COMT medium pass
Csimscaffold330296640 Phenylpropanoid COMT medium pass
Csimscaffold330296660 Phenylpropanoid COMT medium pass
Csimscaffold33290298600 Phenylpropanoid COMT medium pass
Csimscaffold33440299510 Phenylpropanoid COMT medium pass
Csimscaffold3540310800 Phenylpropanoid COMT medium pass
Csimscaffold3540310810 Phenylpropanoid COMT medium pass
Csimscaffold4300348680 Phenylpropanoid COMT low borderline
Csimscaffold4850369510 Phenylpropanoid COMT medium pass
Csimscaffold49160371830 Phenylpropanoid COMT medium pass
Csimscaffold4930372300 Phenylpropanoid COMT medium pass
Csimscaffold4930372310 Phenylpropanoid COMT medium pass
Csimscaffold4930372320 Phenylpropanoid COMT medium pass
Csimscaffold5760398870 Phenylpropanoid COMT medium pass
Csimscaffold5760398880 Phenylpropanoid COMT medium pass
Csimscaffold5980405300 Phenylpropanoid COMT medium pass
Csimscaffold5980405310 Phenylpropanoid COMT medium pass
Csimscaffold60405720 Phenylpropanoid COMT low borderline
Csimscaffold6990434540 Phenylpropanoid COMT medium pass
Csimscaffold6990434560 Phenylpropanoid COMT medium pass
Csimscaffold7010436600 Phenylpropanoid COMT medium pass
Csimscaffold70434810 Phenylpropanoid COMT low borderline
Csimscaffold70434830 Phenylpropanoid COMT medium pass
Csimscaffold710438640 Phenylpropanoid COMT low borderline
Csimscaffold7570451050 Phenylpropanoid COMT medium pass
Csimscaffold7770456430 Phenylpropanoid COMT medium pass
Csimscaffold8250469070 Phenylpropanoid COMT medium pass
Csimscaffold900488250 Phenylpropanoid COMT medium pass
Csimscaffold900488260 Phenylpropanoid COMT medium pass
Csimscaffold9650504230 Phenylpropanoid COMT medium pass
Csimscaffold9650504240 Phenylpropanoid COMT medium pass
Csimscaffold9720506040 Phenylpropanoid COMT medium pass
Csimscaffold9950511610 Phenylpropanoid COMT medium pass
Csimscaffold9950511640 Phenylpropanoid COMT medium pass
Csimscaffold9950511660 Phenylpropanoid COMT medium pass
Csimscaffold11020024100 Phenylpropanoid CSE medium pass
Csimscaffold11970045370 Phenylpropanoid CSE medium pass
Csimscaffold1210048700 Phenylpropanoid CSE medium pass
Csimscaffold14360093520 Phenylpropanoid CSE medium pass