PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold6050407870 Flavonoid IFS medium borderline
Csimscaffold6120409570 Flavonoid IFS medium borderline
Csimscaffold6120409590 Flavonoid IFS medium borderline
Csimscaffold6120409610 Flavonoid IFS medium borderline
Csimscaffold6120409640 Flavonoid IFS medium borderline
Csimscaffold6180411060 Flavonoid IFS low borderline
Csimscaffold6230412690 Flavonoid IFS low borderline
Csimscaffold6230412700 Flavonoid IFS low borderline
Csimscaffold6500420460 Flavonoid IFS medium borderline
Csimscaffold6570422080 Flavonoid IFS medium borderline
Csimscaffold6570422090 Flavonoid IFS medium borderline
Csimscaffold6570422110 Flavonoid IFS medium borderline
Csimscaffold6580422220 Flavonoid IFS low borderline
Csimscaffold6740427310 Flavonoid IFS low borderline
Csimscaffold700435960 Flavonoid IFS medium borderline
Csimscaffold7020437000 Flavonoid IFS medium borderline
Csimscaffold70435260 Flavonoid IFS low borderline
Csimscaffold7090438220 Flavonoid IFS low borderline
Csimscaffold7220442050 Flavonoid IFS low borderline
Csimscaffold7310444640 Flavonoid IFS medium borderline
Csimscaffold7700454850 Flavonoid IFS low borderline
Csimscaffold7700454870 Flavonoid IFS low borderline
Csimscaffold7940460690 Flavonoid IFS medium borderline
Csimscaffold7980461350 Flavonoid IFS medium borderline
Csimscaffold7980461390 Flavonoid IFS medium borderline
Csimscaffold80462650 Flavonoid IFS low borderline
Csimscaffold8160467070 Flavonoid IFS medium borderline
Csimscaffold8190467620 Flavonoid IFS low borderline
Csimscaffold8190467630 Flavonoid IFS low borderline
Csimscaffold8200468200 Flavonoid IFS medium borderline
Csimscaffold8240468880 Flavonoid IFS low borderline
Csimscaffold830470550 Flavonoid IFS medium borderline
Csimscaffold8560476460 Flavonoid IFS low borderline
Csimscaffold8610478120 Flavonoid IFS low borderline
Csimscaffold8660479180 Flavonoid IFS low borderline
Csimscaffold8910485040 Flavonoid IFS medium borderline
Csimscaffold9140492180 Flavonoid IFS medium borderline
Csimscaffold9280495670 Flavonoid IFS medium borderline
Csimscaffold9280495680 Flavonoid IFS medium borderline
Csimscaffold9280495710 Flavonoid IFS medium borderline
Csimscaffold9300496340 Flavonoid IFS medium borderline
Csimscaffold9330496850 Flavonoid IFS low borderline
Csimscaffold9520501230 Flavonoid IFS low borderline
Csimscaffold9570502360 Flavonoid IFS medium borderline
Csimscaffold9580502420 Flavonoid IFS medium borderline
Csimscaffold9580502430 Flavonoid IFS medium borderline
Csimscaffold960502820 Flavonoid IFS low borderline
Csimscaffold960502830 Flavonoid IFS medium borderline
Csimscaffold960502870 Flavonoid IFS medium borderline
Csimscaffold960502880 Flavonoid IFS medium borderline