PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold15160108130 Alkaloid MPO high pass
Csimscaffold15410111910 Alkaloid MPO medium pass
Csimscaffold15410111980 Alkaloid MPO high pass
Csimscaffold1620124020 Alkaloid MPO low borderline
Csimscaffold1620124100 Alkaloid MPO medium pass
Csimscaffold1850156270 Alkaloid MPO medium pass
Csimscaffold2280209840 Alkaloid MPO low borderline
Csimscaffold2280209850 Alkaloid MPO medium pass
Csimscaffold23300216200 Alkaloid MPO medium pass
Csimscaffold34350304810 Alkaloid MPO high pass
Csimscaffold4390352020 Alkaloid MPO low borderline
Csimscaffold5050376630 Alkaloid MPO low borderline
Csimscaffold1310067370 Alkaloid NCS low borderline
Csimscaffold150104630 Alkaloid NCS low borderline
Csimscaffold15040105960 Alkaloid NCS low borderline
Csimscaffold15240109460 Alkaloid NCS medium borderline
Csimscaffold15240109470 Alkaloid NCS medium borderline
Csimscaffold15280109820 Alkaloid NCS medium borderline
Csimscaffold15380111360 Alkaloid NCS medium pass
Csimscaffold16540128950 Alkaloid NCS medium borderline
Csimscaffold17120137790 Alkaloid NCS medium borderline
Csimscaffold180148870 Alkaloid NCS medium borderline
Csimscaffold180148880 Alkaloid NCS medium borderline
Csimscaffold20175270 Alkaloid NCS medium borderline
Csimscaffold25530237910 Alkaloid NCS medium borderline
Csimscaffold2990275220 Alkaloid NCS medium borderline
Csimscaffold32250292210 Alkaloid NCS medium borderline
Csimscaffold3480307110 Alkaloid NCS medium borderline
Csimscaffold37680321780 Alkaloid NCS medium borderline
Csimscaffold4430354760 Alkaloid NCS medium borderline
Csimscaffold4970373520 Alkaloid NCS medium borderline
Csimscaffold5050376890 Alkaloid NCS medium borderline
Csimscaffold6980434410 Alkaloid NCS medium borderline
Csimscaffold7060437600 Alkaloid NCS low borderline
Csimscaffold940497900 Alkaloid NCS medium borderline
Csimscaffold100001290 Alkaloid NMT medium pass
Csimscaffold10000550 Alkaloid NMT low borderline
Csimscaffold10090003720 Alkaloid NMT medium borderline
Csimscaffold1010003980 Alkaloid NMT medium pass
Csimscaffold10210006760 Alkaloid NMT medium pass
Csimscaffold1030008660 Alkaloid NMT low borderline
Csimscaffold1060014860 Alkaloid NMT low borderline
Csimscaffold10650016170 Alkaloid NMT medium borderline
Csimscaffold10650016190 Alkaloid NMT medium borderline
Csimscaffold11290029620 Alkaloid NMT medium pass
Csimscaffold11510034430 Alkaloid NMT medium borderline
Csimscaffold1160036300 Alkaloid NMT medium borderline
Csimscaffold1160036320 Alkaloid NMT medium borderline
Csimscaffold11660037760 Alkaloid NMT medium borderline
Csimscaffold11750040360 Alkaloid NMT medium pass