PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold13750081450 Flavonoid UFGT medium pass
Csimscaffold1460097560 Flavonoid UFGT medium pass
Csimscaffold1460097580 Flavonoid UFGT high pass
Csimscaffold1460097590 Flavonoid UFGT high pass
Csimscaffold1460097600 Flavonoid UFGT high pass
Csimscaffold1460097650 Flavonoid UFGT high pass
Csimscaffold1460097660 Flavonoid UFGT high pass
Csimscaffold1460097710 Flavonoid UFGT high pass
Csimscaffold14720099870 Flavonoid UFGT medium pass
Csimscaffold150104070 Flavonoid UFGT high pass
Csimscaffold15390111580 Flavonoid UFGT medium pass
Csimscaffold15450112490 Flavonoid UFGT medium pass
Csimscaffold1550113240 Flavonoid UFGT high pass
Csimscaffold15580114280 Flavonoid UFGT high pass
Csimscaffold15580114290 Flavonoid UFGT medium pass
Csimscaffold15800118020 Flavonoid UFGT medium pass
Csimscaffold15800118030 Flavonoid UFGT high pass
Csimscaffold16030121690 Flavonoid UFGT high pass
Csimscaffold16670130730 Flavonoid UFGT high pass
Csimscaffold16940134590 Flavonoid UFGT medium pass
Csimscaffold16940134600 Flavonoid UFGT high pass
Csimscaffold170135440 Flavonoid UFGT high pass
Csimscaffold170135460 Flavonoid UFGT medium pass
Csimscaffold170135490 Flavonoid UFGT medium pass
Csimscaffold17040136680 Flavonoid UFGT high pass
Csimscaffold17090137090 Flavonoid UFGT medium pass
Csimscaffold17090137100 Flavonoid UFGT high pass
Csimscaffold17790145780 Flavonoid UFGT high pass
Csimscaffold180148990 Flavonoid UFGT high pass
Csimscaffold1820152450 Flavonoid UFGT high pass
Csimscaffold1820152470 Flavonoid UFGT high pass
Csimscaffold18630157850 Flavonoid UFGT high pass
Csimscaffold18730159000 Flavonoid UFGT medium pass
Csimscaffold18730159010 Flavonoid UFGT medium pass
Csimscaffold18820160040 Flavonoid UFGT high pass
Csimscaffold190162840 Flavonoid UFGT low borderline
Csimscaffold190162910 Flavonoid UFGT medium pass
Csimscaffold19030163640 Flavonoid UFGT high pass
Csimscaffold19030163650 Flavonoid UFGT high pass
Csimscaffold19810172820 Flavonoid UFGT medium pass
Csimscaffold20000176370 Flavonoid UFGT low borderline
Csimscaffold20000176390 Flavonoid UFGT medium pass
Csimscaffold20100177950 Flavonoid UFGT medium pass
Csimscaffold20100177960 Flavonoid UFGT medium pass
Csimscaffold2010177670 Flavonoid UFGT high pass
Csimscaffold2010177690 Flavonoid UFGT high pass
Csimscaffold20720186920 Flavonoid UFGT low borderline
Csimscaffold210190750 Flavonoid UFGT medium pass
Csimscaffold210190770 Flavonoid UFGT medium pass
Csimscaffold210190780 Flavonoid UFGT high pass