PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold35300310410 Phenylpropanoid LAC medium pass
Csimscaffold3820324350 Phenylpropanoid LAC medium pass
Csimscaffold4050336890 Phenylpropanoid LAC medium pass
Csimscaffold4050336910 Phenylpropanoid LAC medium pass
Csimscaffold4050336950 Phenylpropanoid LAC medium pass
Csimscaffold4050336960 Phenylpropanoid LAC medium pass
Csimscaffold4050336970 Phenylpropanoid LAC medium pass
Csimscaffold410339420 Phenylpropanoid LAC medium pass
Csimscaffold4170342750 Phenylpropanoid LAC medium pass
Csimscaffold4170342760 Phenylpropanoid LAC medium pass
Csimscaffold4210344920 Phenylpropanoid LAC medium pass
Csimscaffold500375120 Phenylpropanoid LAC low borderline
Csimscaffold5100379250 Phenylpropanoid LAC medium pass
Csimscaffold570396850 Phenylpropanoid LAC medium pass
Csimscaffold5930404110 Phenylpropanoid LAC medium pass
Csimscaffold5930404120 Phenylpropanoid LAC medium pass
Csimscaffold6450418880 Phenylpropanoid LAC medium pass
Csimscaffold6840430300 Phenylpropanoid LAC medium pass
Csimscaffold6840430310 Phenylpropanoid LAC medium pass
Csimscaffold6980434420 Phenylpropanoid LAC medium pass
Csimscaffold750449050 Phenylpropanoid LAC medium pass
Csimscaffold8840483420 Phenylpropanoid LAC medium pass
Csimscaffold8860483890 Phenylpropanoid LAC low borderline
Csimscaffold8860483900 Phenylpropanoid LAC medium pass
Csimscaffold9190493460 Phenylpropanoid LAC medium pass
Csimscaffold9460499590 Phenylpropanoid LAC low borderline
Csimscaffold970505140 Phenylpropanoid LAC medium pass
Csimscaffold9710505960 Phenylpropanoid LAC medium pass
Csimscaffold9710505970 Phenylpropanoid LAC medium pass
Csimscaffold9710505990 Phenylpropanoid LAC medium pass
Csimscaffold11730040130 Phenylpropanoid PAL low borderline
Csimscaffold19640170570 Phenylpropanoid PAL medium pass
Csimscaffold20430182260 Phenylpropanoid PAL low borderline
Csimscaffold230211590 Phenylpropanoid PAL low borderline
Csimscaffold350307940 Phenylpropanoid PAL medium pass
Csimscaffold350307950 Phenylpropanoid PAL medium pass
Csimscaffold350307960 Phenylpropanoid PAL low borderline
Csimscaffold4760366150 Phenylpropanoid PAL low borderline
Csimscaffold6630423810 Phenylpropanoid PAL high pass
Csimscaffold7800457600 Phenylpropanoid PAL medium pass
Csimscaffold7800457610 Phenylpropanoid PAL medium pass
Csimscaffold7800457640 Phenylpropanoid PAL high pass
Csimscaffold7800457660 Phenylpropanoid PAL high pass
Csimscaffold1000002090 Phenylpropanoid POD medium pass
Csimscaffold100001700 Phenylpropanoid POD medium pass
Csimscaffold10060003240 Phenylpropanoid POD medium pass
Csimscaffold10080003690 Phenylpropanoid POD medium pass
Csimscaffold1020006290 Phenylpropanoid POD medium pass
Csimscaffold10490012580 Phenylpropanoid POD medium pass
Csimscaffold10540013700 Phenylpropanoid POD medium pass