PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold5480390720 Flavonoid ANR medium borderline
Csimscaffold6470419060 Flavonoid ANR medium borderline
Csimscaffold6680424960 Flavonoid ANR medium borderline
Csimscaffold6680424970 Flavonoid ANR medium pass
Csimscaffold6680424980 Flavonoid ANR medium borderline
Csimscaffold6710426360 Flavonoid ANR medium borderline
Csimscaffold8620478260 Flavonoid ANR medium borderline
Csimscaffold9790507630 Flavonoid ANR medium borderline
Csimscaffold15280109820 Flavonoid ANS/LDOX medium borderline
Csimscaffold20440182360 Flavonoid ANS/LDOX medium borderline
Csimscaffold3480307110 Flavonoid ANS/LDOX low borderline
Csimscaffold37330320530 Flavonoid ANS/LDOX medium borderline
Csimscaffold460360870 Flavonoid ANS/LDOX low borderline
Csimscaffold470364340 Flavonoid ANS/LDOX low borderline
Csimscaffold5450389970 Flavonoid ANS/LDOX medium borderline
Csimscaffold6970434230 Flavonoid ANS/LDOX medium borderline
Csimscaffold6980434410 Flavonoid ANS/LDOX medium borderline
Csimscaffold1080019040 Flavonoid C4H medium borderline
Csimscaffold1150034150 Flavonoid C4H medium borderline
Csimscaffold14770100380 Flavonoid C4H medium borderline
Csimscaffold21130192870 Flavonoid C4H medium borderline
Csimscaffold22300205170 Flavonoid C4H low borderline
Csimscaffold22300205180 Flavonoid C4H medium pass
Csimscaffold35960313330 Flavonoid C4H medium borderline
Csimscaffold3910329290 Flavonoid C4H medium borderline
Csimscaffold39250329910 Flavonoid C4H medium borderline
Csimscaffold39250329930 Flavonoid C4H medium borderline
Csimscaffold410339390 Flavonoid C4H low borderline
Csimscaffold4420354400 Flavonoid C4H low borderline
Csimscaffold6280414040 Flavonoid C4H medium pass
Csimscaffold7840458250 Flavonoid C4H medium borderline
Csimscaffold8060464650 Flavonoid C4H medium borderline
Csimscaffold8280469620 Flavonoid C4H medium borderline
Csimscaffold9040489540 Flavonoid C4H medium pass
Csimscaffold9040489550 Flavonoid C4H medium pass
Csimscaffold9040489560 Flavonoid C4H medium pass
Csimscaffold9040489570 Flavonoid C4H medium pass
Csimscaffold9810508380 Flavonoid C4H low borderline
Csimscaffold10120004820 Flavonoid CHI medium pass
Csimscaffold1660129910 Flavonoid CHI medium pass
Csimscaffold19850173140 Flavonoid CHI medium pass
Csimscaffold3070281560 Flavonoid CHI medium pass
Csimscaffold3550311480 Flavonoid CHI medium pass
Csimscaffold4210344830 Flavonoid CHI medium pass
Csimscaffold4210344840 Flavonoid CHI medium pass
Csimscaffold4260346520 Flavonoid CHI low borderline
Csimscaffold1020006200 Flavonoid CHS medium pass
Csimscaffold1020006240 Flavonoid CHS medium pass
Csimscaffold1020006250 Flavonoid CHS low borderline
Csimscaffold1020006260 Flavonoid CHS medium pass