PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold7280443440 Flavonoid 4CL low borderline
Csimscaffold7360445810 Flavonoid 4CL low borderline
Csimscaffold7420447540 Flavonoid 4CL medium pass
Csimscaffold7530450130 Flavonoid 4CL low borderline
Csimscaffold760451870 Flavonoid 4CL medium pass
Csimscaffold7620452420 Flavonoid 4CL low borderline
Csimscaffold7950460890 Flavonoid 4CL medium pass
Csimscaffold8090465180 Flavonoid 4CL low borderline
Csimscaffold8460473640 Flavonoid 4CL medium pass
Csimscaffold8560476530 Flavonoid 4CL medium pass
Csimscaffold8560476540 Flavonoid 4CL medium pass
Csimscaffold8970486270 Flavonoid 4CL low borderline
Csimscaffold9100491230 Flavonoid 4CL medium pass
Csimscaffold9600503090 Flavonoid 4CL medium pass
Csimscaffold9600503100 Flavonoid 4CL medium pass
Csimscaffold9600503120 Flavonoid 4CL low borderline
Csimscaffold9600503130 Flavonoid 4CL low borderline
Csimscaffold9600503140 Flavonoid 4CL low borderline
Csimscaffold10430011630 Flavonoid ANR low borderline
Csimscaffold10640015930 Flavonoid ANR medium borderline
Csimscaffold110022870 Flavonoid ANR medium borderline
Csimscaffold12140049390 Flavonoid ANR medium borderline
Csimscaffold12140049400 Flavonoid ANR medium borderline
Csimscaffold12140049420 Flavonoid ANR medium pass
Csimscaffold12590057380 Flavonoid ANR medium borderline
Csimscaffold1270059270 Flavonoid ANR medium borderline
Csimscaffold13380072380 Flavonoid ANR low borderline
Csimscaffold13380072390 Flavonoid ANR medium borderline
Csimscaffold13380072400 Flavonoid ANR medium borderline
Csimscaffold13750081480 Flavonoid ANR low borderline
Csimscaffold1380082960 Flavonoid ANR medium borderline
Csimscaffold16670130790 Flavonoid ANR medium pass
Csimscaffold1730140030 Flavonoid ANR low borderline
Csimscaffold19370167360 Flavonoid ANR medium borderline
Csimscaffold21800199450 Flavonoid ANR low borderline
Csimscaffold22090202770 Flavonoid ANR medium borderline
Csimscaffold26540247240 Flavonoid ANR low borderline
Csimscaffold28010261480 Flavonoid ANR medium borderline
Csimscaffold28010261490 Flavonoid ANR medium borderline
Csimscaffold310284070 Flavonoid ANR medium borderline
Csimscaffold3110284920 Flavonoid ANR low borderline
Csimscaffold37250320150 Flavonoid ANR medium borderline
Csimscaffold4020335590 Flavonoid ANR medium borderline
Csimscaffold420344320 Flavonoid ANR medium pass
Csimscaffold4430354840 Flavonoid ANR medium borderline
Csimscaffold46490362610 Flavonoid ANR medium borderline
Csimscaffold4970373820 Flavonoid ANR medium borderline
Csimscaffold50374470 Flavonoid ANR medium borderline
Csimscaffold5480390700 Flavonoid ANR medium borderline
Csimscaffold5480390710 Flavonoid ANR medium borderline