PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold16260125230 Flavonoid 4CL medium pass
Csimscaffold16370126600 Flavonoid 4CL low borderline
Csimscaffold16370126610 Flavonoid 4CL medium pass
Csimscaffold1750142370 Flavonoid 4CL low borderline
Csimscaffold17600144020 Flavonoid 4CL medium pass
Csimscaffold17860146880 Flavonoid 4CL medium pass
Csimscaffold18440155310 Flavonoid 4CL medium pass
Csimscaffold1910164130 Flavonoid 4CL low borderline
Csimscaffold19490168750 Flavonoid 4CL medium pass
Csimscaffold20050176700 Flavonoid 4CL low borderline
Csimscaffold2050183360 Flavonoid 4CL low borderline
Csimscaffold20780187540 Flavonoid 4CL medium pass
Csimscaffold210190580 Flavonoid 4CL low borderline
Csimscaffold21410195840 Flavonoid 4CL medium pass
Csimscaffold22310205220 Flavonoid 4CL low borderline
Csimscaffold23920222070 Flavonoid 4CL medium pass
Csimscaffold240222840 Flavonoid 4CL medium pass
Csimscaffold2560238260 Flavonoid 4CL low borderline
Csimscaffold26700248970 Flavonoid 4CL low borderline
Csimscaffold2750256590 Flavonoid 4CL medium pass
Csimscaffold27670257770 Flavonoid 4CL medium pass
Csimscaffold29120269880 Flavonoid 4CL medium pass
Csimscaffold29120269890 Flavonoid 4CL low borderline
Csimscaffold2970273470 Flavonoid 4CL low borderline
Csimscaffold30276280 Flavonoid 4CL medium pass
Csimscaffold3100284380 Flavonoid 4CL low borderline
Csimscaffold33050297220 Flavonoid 4CL low borderline
Csimscaffold33050297230 Flavonoid 4CL low borderline
Csimscaffold3620314830 Flavonoid 4CL medium pass
Csimscaffold3620314840 Flavonoid 4CL medium pass
Csimscaffold3620314850 Flavonoid 4CL medium pass
Csimscaffold3660317080 Flavonoid 4CL low borderline
Csimscaffold3850325810 Flavonoid 4CL medium pass
Csimscaffold4010335390 Flavonoid 4CL medium pass
Csimscaffold40333650 Flavonoid 4CL low borderline
Csimscaffold4500357480 Flavonoid 4CL medium pass
Csimscaffold4500357500 Flavonoid 4CL medium pass
Csimscaffold4500357510 Flavonoid 4CL medium pass
Csimscaffold4610361590 Flavonoid 4CL medium pass
Csimscaffold4780366760 Flavonoid 4CL medium pass
Csimscaffold4900371400 Flavonoid 4CL low borderline
Csimscaffold4950373020 Flavonoid 4CL medium pass
Csimscaffold4950373030 Flavonoid 4CL medium pass
Csimscaffold4950373040 Flavonoid 4CL medium pass
Csimscaffold5850401200 Flavonoid 4CL medium pass
Csimscaffold6110409560 Flavonoid 4CL low borderline
Csimscaffold6660424430 Flavonoid 4CL medium pass
Csimscaffold700436130 Flavonoid 4CL medium pass
Csimscaffold700436150 Flavonoid 4CL low borderline
Csimscaffold700436160 Flavonoid 4CL medium pass