PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
Csimscaffold630414770 Alkaloid 7DLGT low borderline
Csimscaffold630414790 Alkaloid 7DLGT high pass
Csimscaffold6480419370 Alkaloid 7DLGT medium pass
Csimscaffold6480419380 Alkaloid 7DLGT medium pass
Csimscaffold6530421120 Alkaloid 7DLGT medium pass
Csimscaffold6530421130 Alkaloid 7DLGT medium pass
Csimscaffold6530421140 Alkaloid 7DLGT medium pass
Csimscaffold660422920 Alkaloid 7DLGT high pass
Csimscaffold670425600 Alkaloid 7DLGT medium pass
Csimscaffold6780428260 Alkaloid 7DLGT low borderline
Csimscaffold690432120 Alkaloid 7DLGT medium pass
Csimscaffold690432140 Alkaloid 7DLGT low borderline
Csimscaffold690432160 Alkaloid 7DLGT medium pass
Csimscaffold690432180 Alkaloid 7DLGT low borderline
Csimscaffold690432200 Alkaloid 7DLGT medium pass
Csimscaffold7070437940 Alkaloid 7DLGT low borderline
Csimscaffold7110439130 Alkaloid 7DLGT low borderline
Csimscaffold7130439600 Alkaloid 7DLGT low borderline
Csimscaffold730443940 Alkaloid 7DLGT medium pass
Csimscaffold730443960 Alkaloid 7DLGT medium pass
Csimscaffold730443980 Alkaloid 7DLGT low borderline
Csimscaffold730443990 Alkaloid 7DLGT high pass
Csimscaffold7330445160 Alkaloid 7DLGT low borderline
Csimscaffold7330445170 Alkaloid 7DLGT low borderline
Csimscaffold7370446100 Alkaloid 7DLGT low borderline
Csimscaffold7800457560 Alkaloid 7DLGT medium pass
Csimscaffold7930460530 Alkaloid 7DLGT low borderline
Csimscaffold8130466340 Alkaloid 7DLGT low borderline
Csimscaffold8150466800 Alkaloid 7DLGT low borderline
Csimscaffold8350471460 Alkaloid 7DLGT medium pass
Csimscaffold8350471480 Alkaloid 7DLGT medium pass
Csimscaffold8350471490 Alkaloid 7DLGT low borderline
Csimscaffold8350471500 Alkaloid 7DLGT medium pass
Csimscaffold8390472170 Alkaloid 7DLGT medium pass
Csimscaffold850475160 Alkaloid 7DLGT medium pass
Csimscaffold8650478990 Alkaloid 7DLGT medium pass
Csimscaffold8950485980 Alkaloid 7DLGT low borderline
Csimscaffold9270495580 Alkaloid 7DLGT low borderline
Csimscaffold9270495610 Alkaloid 7DLGT medium pass
Csimscaffold950500400 Alkaloid 7DLGT high pass
Csimscaffold950500410 Alkaloid 7DLGT medium pass
Csimscaffold9800508250 Alkaloid 7DLGT low borderline
Csimscaffold9840509020 Alkaloid 7DLGT low borderline
Csimscaffold990510560 Alkaloid 7DLGT medium pass
Csimscaffold990510570 Alkaloid 7DLGT high pass
Csimscaffold990510590 Alkaloid 7DLGT high pass
Csimscaffold1140031680 Alkaloid 7DLH low borderline
Csimscaffold13810083220 Alkaloid 7DLH medium borderline
Csimscaffold13810083230 Alkaloid 7DLH medium borderline
Csimscaffold13810083250 Alkaloid 7DLH medium borderline