PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold880482490 Terpenoid BAHD low borderline
Csimscaffold8980486610 Terpenoid BAHD medium pass
Csimscaffold8990486710 Terpenoid BAHD medium pass
Csimscaffold8990486720 Terpenoid BAHD low borderline
Csimscaffold90486850 Terpenoid BAHD low borderline
Csimscaffold90487530 Terpenoid BAHD medium pass
Csimscaffold90487720 Terpenoid BAHD low borderline
Csimscaffold90487760 Terpenoid BAHD medium pass
Csimscaffold9130491900 Terpenoid BAHD medium pass
Csimscaffold9180493010 Terpenoid BAHD medium pass
Csimscaffold9200494260 Terpenoid BAHD medium pass
Csimscaffold9270495630 Terpenoid BAHD medium pass
Csimscaffold9360497290 Terpenoid BAHD medium pass
Csimscaffold9610503530 Terpenoid BAHD medium pass
Csimscaffold9620503760 Terpenoid BAHD low borderline
Csimscaffold9620503770 Terpenoid BAHD low borderline
Csimscaffold9700505820 Terpenoid BAHD low borderline
Csimscaffold970505150 Terpenoid BAHD medium pass
Csimscaffold970505180 Terpenoid BAHD medium pass
Csimscaffold9750506550 Terpenoid BAHD medium pass
Csimscaffold9760506900 Terpenoid BAHD low borderline
Csimscaffold9790507600 Terpenoid BAHD medium pass
Csimscaffold9940511510 Terpenoid BAHD medium pass
Csimscaffold9960511760 Terpenoid BAHD low borderline
Csimscaffold11540035100 Terpenoid CMK/IspE high pass
Csimscaffold19860173310 Terpenoid CMK/IspE low borderline
Csimscaffold2190200140 Terpenoid CMK/IspE low borderline
Csimscaffold480367560 Terpenoid CMK/IspE high pass
Csimscaffold8300470870 Terpenoid CMK/IspE low borderline
Csimscaffold10110004430 Terpenoid CYP71 medium borderline
Csimscaffold10220006960 Terpenoid CYP71 medium borderline
Csimscaffold10220007010 Terpenoid CYP71 medium borderline
Csimscaffold10220007080 Terpenoid CYP71 medium borderline
Csimscaffold10220007100 Terpenoid CYP71 low borderline
Csimscaffold10590014590 Terpenoid CYP71 medium borderline
Csimscaffold10590014610 Terpenoid CYP71 medium borderline
Csimscaffold10760018250 Terpenoid CYP71 medium pass
Csimscaffold1180041250 Terpenoid CYP71 medium borderline
Csimscaffold11950044960 Terpenoid CYP71 medium pass
Csimscaffold12000046890 Terpenoid CYP71 medium borderline
Csimscaffold12000046900 Terpenoid CYP71 medium borderline
Csimscaffold1340072950 Terpenoid CYP71 low borderline
Csimscaffold1420090470 Terpenoid CYP71 low borderline
Csimscaffold1430092270 Terpenoid CYP71 low borderline
Csimscaffold15030105760 Terpenoid CYP71 medium borderline
Csimscaffold15030105770 Terpenoid CYP71 low borderline
Csimscaffold15030105790 Terpenoid CYP71 medium borderline
Csimscaffold15340110920 Terpenoid CYP71 medium pass
Csimscaffold16710131660 Terpenoid CYP71 medium borderline
Csimscaffold16710131680 Terpenoid CYP71 low borderline