PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Lsic05G0011470.1 Alkaloid 7DLGT low borderline
Lsic05G0011480.1 Alkaloid 7DLGT low borderline
Lsic05G0013580.1 Alkaloid 7DLGT high pass
Lsic05G0020550.1 Alkaloid 7DLGT low borderline
Lsic05G0020560.1 Alkaloid 7DLGT low borderline
Lsic05G0021050.1 Alkaloid 7DLGT medium pass
Lsic05G0021060.1 Alkaloid 7DLGT low borderline
Lsic06G0011150.1 Alkaloid 7DLGT low borderline
Lsic07G0000870.1 Alkaloid 7DLGT low borderline
Lsic07G0001930.1 Alkaloid 7DLGT high pass
Lsic07G0009240.1 Alkaloid 7DLGT low borderline
Lsic08G0008770.1 Alkaloid 7DLGT low borderline
Lsic09G0016090.1 Alkaloid 7DLGT medium pass
Lsic09G0016170.1 Alkaloid 7DLGT medium pass
Lsic09G0016180.1 Alkaloid 7DLGT medium pass
Lsic09G0016200.1 Alkaloid 7DLGT medium pass
Lsic09G0016210.1 Alkaloid 7DLGT low borderline
Lsic10G0001790.1 Alkaloid 7DLGT medium pass
Lsic10G0001800.1 Alkaloid 7DLGT medium pass
Lsic10G0005180.1 Alkaloid 7DLGT medium pass
Lsic10G0005200.1 Alkaloid 7DLGT low borderline
Lsic10G0009460.1 Alkaloid 7DLGT low borderline
Lsic10G0009480.1 Alkaloid 7DLGT medium pass
Lsic10G0009490.1 Alkaloid 7DLGT low borderline
Lsic10G0009500.1 Alkaloid 7DLGT low borderline
Lsic10G0009510.1 Alkaloid 7DLGT low borderline
Lsic10G0009520.1 Alkaloid 7DLGT low borderline
Lsic10G0009530.1 Alkaloid 7DLGT low borderline
Lsic10G0010380.1 Alkaloid 7DLGT low borderline
Lsic10G0012410.1 Alkaloid 7DLGT low borderline
Lsic10G0014550.1 Alkaloid 7DLGT low borderline
Lsic10G0014560.1 Alkaloid 7DLGT low borderline
Lsic10G0014570.1 Alkaloid 7DLGT low borderline
Lsic11G0007350.1 Alkaloid 7DLGT low borderline
Lsic11G0013750.1 Alkaloid 7DLGT low borderline
Lsic11G0014160.1 Alkaloid 7DLGT low borderline
Lsic11G0014170.1 Alkaloid 7DLGT low borderline
Lsic11G0014180.1 Alkaloid 7DLGT low borderline