PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
Lsic00G0001970.1 Terpenoid CYP76 medium pass
Lsic01G0001570.1 Terpenoid CYP76 low borderline
Lsic01G0004140.1 Terpenoid CYP76 low borderline
Lsic01G0005000.1 Terpenoid CYP76 medium pass
Lsic01G0005010.1 Terpenoid CYP76 low borderline
Lsic01G0006220.1 Terpenoid CYP76 low borderline
Lsic01G0007130.1 Terpenoid CYP76 medium pass
Lsic01G0007140.1 Terpenoid CYP76 low borderline
Lsic01G0007160.1 Terpenoid CYP76 medium borderline
Lsic01G0007170.1 Terpenoid CYP76 low borderline
Lsic01G0007180.1 Terpenoid CYP76 medium borderline
Lsic01G0007190.1 Terpenoid CYP76 medium borderline
Lsic01G0007200.1 Terpenoid CYP76 medium borderline
Lsic01G0007210.1 Terpenoid CYP76 medium borderline
Lsic01G0007220.1 Terpenoid CYP76 medium borderline
Lsic01G0009410.1 Terpenoid CYP76 medium borderline
Lsic01G0009420.1 Terpenoid CYP76 medium borderline
Lsic01G0009430.1 Terpenoid CYP76 medium pass
Lsic01G0009440.1 Terpenoid CYP76 medium pass
Lsic01G0010650.1 Terpenoid CYP76 low borderline
Lsic01G0010680.1 Terpenoid CYP76 low borderline
Lsic01G0010740.1 Terpenoid CYP76 low borderline
Lsic01G0018910.1 Terpenoid CYP76 medium borderline
Lsic02G0001310.1 Terpenoid CYP76 medium borderline
Lsic02G0002970.1 Terpenoid CYP76 low borderline
Lsic02G0004260.1 Terpenoid CYP76 medium borderline
Lsic02G0004270.1 Terpenoid CYP76 low borderline
Lsic02G0004300.1 Terpenoid CYP76 medium borderline
Lsic02G0004310.1 Terpenoid CYP76 medium borderline
Lsic02G0004320.1 Terpenoid CYP76 low borderline
Lsic02G0004330.1 Terpenoid CYP76 medium borderline
Lsic02G0004350.1 Terpenoid CYP76 medium pass
Lsic02G0004390.1 Terpenoid CYP76 medium borderline
Lsic02G0004400.1 Terpenoid CYP76 medium borderline
Lsic02G0012060.1 Terpenoid CYP76 medium pass
Lsic02G0016080.1 Terpenoid CYP76 low borderline
Lsic02G0025950.1 Terpenoid CYP76 medium borderline
Lsic02G0025960.1 Terpenoid CYP76 low borderline
Lsic03G0002430.1 Terpenoid CYP76 low borderline
Lsic03G0011260.1 Terpenoid CYP76 low borderline
Lsic03G0012180.1 Terpenoid CYP76 low borderline
Lsic03G0012190.1 Terpenoid CYP76 medium borderline
Lsic03G0016270.1 Terpenoid CYP76 medium borderline
Lsic03G0016280.1 Terpenoid CYP76 medium borderline
Lsic03G0017130.1 Terpenoid CYP76 medium borderline
Lsic03G0017140.1 Terpenoid CYP76 medium pass
Lsic03G0019480.1 Terpenoid CYP76 medium pass
Lsic04G0001330.1 Terpenoid CYP76 medium pass
Lsic04G0006150.1 Terpenoid CYP76 medium pass
Lsic04G0006160.1 Terpenoid CYP76 medium borderline