PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status Best Target
Lsic01G0001920.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic01G0001930.1 Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic02G0008890.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic03G0011310.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic03G0016100.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic04G0019710.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic05G0006400.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic05G0017100.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Lsic05G0017110.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic05G0017140.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic05G0017160.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Lsic05G0017170.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00003__sp_O04274_LDOX_PERFR
Lsic07G0005210.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Lsic07G0008540.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH