PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Lsic01G0001480.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0001920.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0001930.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0001940.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0004650.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0011700.1 Alkaloid CODM/T6ODM medium borderline
Lsic02G0006300.1 Alkaloid CODM/T6ODM medium borderline
Lsic02G0008890.1 Alkaloid CODM/T6ODM medium borderline
Lsic02G0027550.1 Alkaloid CODM/T6ODM medium borderline
Lsic02G0027560.1 Alkaloid CODM/T6ODM medium borderline
Lsic03G0011310.1 Alkaloid CODM/T6ODM medium borderline
Lsic03G0016090.1 Alkaloid CODM/T6ODM medium borderline
Lsic03G0016100.1 Alkaloid CODM/T6ODM medium borderline
Lsic03G0022170.1 Alkaloid CODM/T6ODM medium borderline
Lsic04G0009830.1 Alkaloid CODM/T6ODM medium borderline
Lsic04G0011070.1 Alkaloid CODM/T6ODM medium borderline
Lsic04G0011840.1 Alkaloid CODM/T6ODM medium borderline
Lsic04G0019710.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0006400.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0012810.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0017070.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0017080.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0017090.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0017120.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0017130.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0017140.1 Alkaloid CODM/T6ODM medium borderline
Lsic05G0017160.1 Alkaloid CODM/T6ODM medium borderline
Lsic07G0004910.1 Alkaloid CODM/T6ODM medium borderline
Lsic07G0007820.1 Alkaloid CODM/T6ODM low borderline
Lsic07G0007830.1 Alkaloid CODM/T6ODM medium borderline
Lsic07G0012800.1 Alkaloid CODM/T6ODM medium borderline
Lsic08G0011560.1 Alkaloid CODM/T6ODM medium borderline
Lsic09G0001220.1 Alkaloid CODM/T6ODM medium borderline
Lsic09G0012460.1 Alkaloid CODM/T6ODM medium borderline
Lsic09G0019170.1 Alkaloid CODM/T6ODM medium borderline
Lsic10G0015700.1 Alkaloid CODM/T6ODM medium borderline
Lsic11G0001940.1 Alkaloid CODM/T6ODM medium borderline
Lsic11G0008220.1 Alkaloid CODM/T6ODM medium borderline
Lsic11G0010360.1 Alkaloid CODM/T6ODM medium borderline