PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Lsic00G0000790.1 Flavonoid 4CL medium pass
Lsic01G0000800.1 Flavonoid 4CL low borderline
Lsic01G0005400.1 Flavonoid 4CL medium pass
Lsic02G0004840.1 Flavonoid 4CL low borderline
Lsic02G0026350.1 Flavonoid 4CL medium pass
Lsic02G0026360.1 Flavonoid 4CL medium pass
Lsic02G0026370.1 Flavonoid 4CL medium pass
Lsic03G0000100.1 Flavonoid 4CL medium pass
Lsic03G0011290.1 Flavonoid 4CL low borderline
Lsic03G0012450.1 Flavonoid 4CL medium pass
Lsic03G0020060.1 Flavonoid 4CL medium pass
Lsic04G0001120.1 Flavonoid 4CL medium pass
Lsic04G0006900.1 Flavonoid 4CL medium pass
Lsic04G0017920.1 Flavonoid 4CL low borderline
Lsic04G0017990.1 Flavonoid 4CL medium pass
Lsic04G0018000.1 Flavonoid 4CL medium pass
Lsic05G0004210.1 Flavonoid 4CL low borderline
Lsic05G0006780.1 Flavonoid 4CL low borderline
Lsic05G0014350.1 Flavonoid 4CL low borderline
Lsic05G0015810.1 Flavonoid 4CL medium pass
Lsic06G0011330.1 Flavonoid 4CL medium pass
Lsic07G0007170.1 Flavonoid 4CL low borderline
Lsic07G0010690.1 Flavonoid 4CL medium pass
Lsic09G0001760.1 Flavonoid 4CL low borderline
Lsic09G0002720.1 Flavonoid 4CL medium pass
Lsic09G0004650.1 Flavonoid 4CL medium pass
Lsic09G0008420.1 Flavonoid 4CL medium pass
Lsic09G0008810.1 Flavonoid 4CL medium pass
Lsic09G0008820.1 Flavonoid 4CL medium pass
Lsic09G0008870.1 Flavonoid 4CL medium pass
Lsic09G0008880.1 Flavonoid 4CL medium pass
Lsic09G0008890.1 Flavonoid 4CL medium pass
Lsic09G0016140.1 Flavonoid 4CL low borderline
Lsic10G0002320.1 Flavonoid 4CL medium pass
Lsic10G0003310.1 Flavonoid 4CL low borderline
Lsic11G0007230.1 Flavonoid 4CL medium pass
Lsic11G0013370.1 Flavonoid 4CL low borderline
Lsic02G0012340.1 Flavonoid ANR medium borderline
Lsic02G0015710.1 Flavonoid ANR low borderline
Lsic02G0026680.1 Flavonoid ANR medium borderline
Lsic03G0013820.1 Flavonoid ANR low borderline
Lsic04G0002570.1 Flavonoid ANR medium borderline
Lsic04G0015750.1 Flavonoid ANR low borderline
Lsic04G0024200.1 Flavonoid ANR low borderline
Lsic05G0006650.1 Flavonoid ANR medium borderline
Lsic05G0007740.1 Flavonoid ANR medium borderline
Lsic05G0021080.1 Flavonoid ANR medium pass
Lsic05G0021090.1 Flavonoid ANR medium pass
Lsic06G0010910.1 Flavonoid ANR low borderline
Lsic08G0008240.1 Flavonoid ANR low borderline