PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
Lsic01G0001480.1 Flavonoid F3H medium borderline
Lsic01G0001940.1 Flavonoid F3H medium borderline
Lsic01G0004650.1 Flavonoid F3H medium borderline
Lsic01G0011700.1 Flavonoid F3H medium borderline
Lsic02G0000620.1 Flavonoid F3H low borderline
Lsic02G0002920.1 Flavonoid F3H low borderline
Lsic02G0006300.1 Flavonoid F3H low borderline
Lsic02G0011230.1 Flavonoid F3H low borderline
Lsic02G0022030.1 Flavonoid F3H low borderline
Lsic02G0022040.1 Flavonoid F3H low borderline
Lsic02G0022190.1 Flavonoid F3H low borderline
Lsic02G0022200.1 Flavonoid F3H medium borderline
Lsic02G0022210.1 Flavonoid F3H medium borderline
Lsic02G0022250.1 Flavonoid F3H medium borderline
Lsic02G0022260.1 Flavonoid F3H medium borderline
Lsic02G0024970.1 Flavonoid F3H low borderline
Lsic02G0027530.1 Flavonoid F3H low borderline
Lsic02G0027540.1 Flavonoid F3H low borderline
Lsic02G0027550.1 Flavonoid F3H medium borderline
Lsic02G0027560.1 Flavonoid F3H medium borderline
Lsic03G0009640.1 Flavonoid F3H medium borderline
Lsic03G0016080.1 Flavonoid F3H medium pass
Lsic03G0016090.1 Flavonoid F3H medium borderline
Lsic03G0019660.1 Flavonoid F3H medium borderline
Lsic03G0022170.1 Flavonoid F3H medium borderline
Lsic04G0006500.1 Flavonoid F3H low borderline
Lsic04G0009830.1 Flavonoid F3H medium borderline
Lsic04G0011070.1 Flavonoid F3H medium borderline
Lsic04G0011840.1 Flavonoid F3H medium borderline
Lsic04G0024150.1 Flavonoid F3H medium borderline
Lsic05G0012810.1 Flavonoid F3H medium borderline
Lsic05G0015260.1 Flavonoid F3H medium borderline
Lsic05G0017070.1 Flavonoid F3H medium borderline
Lsic05G0017080.1 Flavonoid F3H medium borderline
Lsic05G0017090.1 Flavonoid F3H medium borderline
Lsic05G0017120.1 Flavonoid F3H medium borderline
Lsic05G0017130.1 Flavonoid F3H medium borderline
Lsic06G0010220.1 Flavonoid F3H medium borderline
Lsic06G0010230.1 Flavonoid F3H medium borderline
Lsic07G0001050.1 Flavonoid F3H low borderline
Lsic07G0001310.1 Flavonoid F3H medium borderline
Lsic07G0003200.1 Flavonoid F3H medium borderline
Lsic07G0004910.1 Flavonoid F3H low borderline
Lsic07G0007830.1 Flavonoid F3H medium borderline
Lsic07G0011050.1 Flavonoid F3H medium borderline
Lsic07G0012800.1 Flavonoid F3H low borderline
Lsic08G0003320.1 Flavonoid F3H medium borderline
Lsic08G0004100.1 Flavonoid F3H medium borderline
Lsic08G0004870.1 Flavonoid F3H medium borderline
Lsic08G0011550.1 Flavonoid F3H medium borderline