PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
Reset
Gene Pathway Family Confidence Status
Lsic01G0001800.1 Alkaloid GS low borderline
Lsic01G0003470.1 Alkaloid GS low borderline
Lsic01G0008230.1 Alkaloid GS medium pass
Lsic01G0020150.1 Alkaloid GS low borderline
Lsic01G0020170.1 Alkaloid GS low borderline
Lsic01G0020190.1 Alkaloid GS medium pass
Lsic02G0014110.1 Alkaloid GS low borderline
Lsic02G0015600.1 Alkaloid GS low borderline
Lsic02G0021140.1 Alkaloid GS low borderline
Lsic02G0021150.1 Alkaloid GS low borderline
Lsic02G0021160.1 Alkaloid GS low borderline
Lsic03G0002460.1 Alkaloid GS low borderline
Lsic03G0005320.1 Alkaloid GS high pass
Lsic04G0005470.1 Alkaloid GS low borderline
Lsic04G0017680.1 Alkaloid GS high pass
Lsic05G0002390.1 Alkaloid GS high pass
Lsic05G0012680.1 Alkaloid GS medium pass
Lsic08G0014710.1 Alkaloid GS low borderline
Lsic09G0001110.1 Alkaloid GS medium pass
Lsic09G0004770.1 Alkaloid GS low borderline
Lsic10G0006980.1 Alkaloid GS high pass
Lsic10G0006990.1 Alkaloid GS high pass