PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Lsic01G0006220.1 Flavonoid FNS medium borderline
Lsic01G0009410.1 Flavonoid FNS medium borderline
Lsic01G0010640.1 Flavonoid FNS low borderline
Lsic02G0004320.1 Flavonoid FNS medium borderline
Lsic02G0004340.1 Flavonoid FNS medium borderline
Lsic02G0025960.1 Flavonoid FNS medium borderline
Lsic02G0029240.1 Flavonoid FNS low borderline
Lsic03G0012180.1 Flavonoid FNS medium borderline
Lsic03G0012200.1 Flavonoid FNS medium borderline
Lsic04G0014190.1 Flavonoid FNS medium borderline
Lsic04G0016210.1 Flavonoid FNS medium borderline
Lsic05G0019840.1 Flavonoid FNS medium borderline
Lsic05G0021220.1 Flavonoid FNS low borderline
Lsic07G0003900.1 Flavonoid FNS medium borderline
Lsic10G0001640.1 Flavonoid FNS medium borderline
Lsic10G0001650.1 Flavonoid FNS medium borderline
Lsic10G0001660.1 Flavonoid FNS medium borderline
Lsic10G0001690.1 Flavonoid FNS medium borderline
Lsic10G0001710.1 Flavonoid FNS medium borderline
Lsic10G0002460.1 Flavonoid FNS medium borderline
Lsic10G0002740.1 Flavonoid FNS medium borderline