PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Lsic01G0012770.1 Alkaloid SLS medium borderline
Lsic03G0002430.1 Alkaloid SLS medium borderline
Lsic03G0014900.1 Alkaloid SLS medium borderline
Lsic04G0003490.1 Alkaloid SLS medium borderline
Lsic04G0003500.1 Alkaloid SLS medium borderline
Lsic04G0010010.1 Alkaloid SLS medium borderline
Lsic04G0016450.1 Alkaloid SLS medium borderline
Lsic04G0016460.1 Alkaloid SLS medium borderline
Lsic04G0019590.1 Alkaloid SLS medium borderline
Lsic04G0019610.1 Alkaloid SLS medium borderline
Lsic04G0019630.1 Alkaloid SLS low borderline
Lsic06G0009380.1 Alkaloid SLS medium borderline
Lsic07G0007900.1 Alkaloid SLS medium borderline
Lsic09G0011100.1 Alkaloid SLS medium borderline
Lsic10G0014640.1 Alkaloid SLS low borderline
Lsic11G0002960.1 Alkaloid SLS medium borderline