PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Lsic00G0000110.1 Flavonoid IFR low borderline
Lsic00G0000830.1 Flavonoid IFR high pass
Lsic00G0000840.1 Flavonoid IFR high pass
Lsic00G0000850.1 Flavonoid IFR high pass
Lsic01G0001600.1 Flavonoid IFR low borderline
Lsic01G0014330.1 Flavonoid IFR low borderline
Lsic02G0008300.1 Flavonoid IFR low borderline
Lsic02G0011420.1 Flavonoid IFR low borderline
Lsic03G0006050.1 Flavonoid IFR medium pass
Lsic03G0010750.1 Flavonoid IFR low borderline
Lsic03G0015210.1 Flavonoid IFR low borderline
Lsic05G0002580.1 Flavonoid IFR low borderline
Lsic05G0006250.1 Flavonoid IFR medium pass
Lsic05G0008760.1 Flavonoid IFR high pass
Lsic05G0013430.1 Flavonoid IFR low borderline
Lsic05G0015020.1 Flavonoid IFR medium pass
Lsic06G0005520.1 Flavonoid IFR low borderline
Lsic07G0007240.1 Flavonoid IFR low borderline
Lsic08G0012680.1 Flavonoid IFR low borderline
Lsic08G0013870.1 Flavonoid IFR high pass
Lsic09G0014380.1 Flavonoid IFR low borderline
Lsic09G0018020.1 Flavonoid IFR low borderline
Lsic10G0003760.1 Flavonoid IFR high pass
Lsic10G0003770.1 Flavonoid IFR high pass
Lsic10G0003780.1 Flavonoid IFR high pass
Lsic10G0008210.1 Flavonoid IFR low borderline
Lsic10G0008220.1 Flavonoid IFR medium pass
Lsic10G0011720.1 Flavonoid IFR low borderline
Lsic11G0011130.1 Flavonoid IFR high pass
Lsic11G0011160.1 Flavonoid IFR high pass
Lsic11G0011170.1 Flavonoid IFR medium pass
Lsic11G0011180.1 Flavonoid IFR medium pass
Lsic11G0011190.1 Flavonoid IFR medium pass
Lsic11G0011200.1 Flavonoid IFR medium pass
Lsic11G0011410.1 Flavonoid IFR low borderline