PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
Reset
Gene Pathway Family Confidence Status
Lsic01G0006380.1 Steroid CYP90D1 medium borderline
Lsic01G0007190.1 Steroid CYP90D1 low borderline
Lsic02G0001310.1 Steroid CYP90D1 low borderline
Lsic02G0004270.1 Steroid CYP90D1 low borderline
Lsic02G0020170.1 Steroid CYP90D1 medium borderline
Lsic02G0020570.1 Steroid CYP90D1 low borderline
Lsic02G0029440.1 Steroid CYP90D1 medium borderline
Lsic03G0012180.1 Steroid CYP90D1 low borderline
Lsic03G0012190.1 Steroid CYP90D1 low borderline
Lsic03G0017130.1 Steroid CYP90D1 low borderline
Lsic03G0017140.1 Steroid CYP90D1 low borderline
Lsic03G0019480.1 Steroid CYP90D1 low borderline
Lsic04G0009720.1 Steroid CYP90D1 medium borderline
Lsic04G0012090.1 Steroid CYP90D1 medium pass
Lsic04G0012100.1 Steroid CYP90D1 medium borderline
Lsic04G0016080.1 Steroid CYP90D1 low borderline
Lsic04G0016100.1 Steroid CYP90D1 low borderline
Lsic04G0016150.1 Steroid CYP90D1 low borderline
Lsic04G0016160.1 Steroid CYP90D1 low borderline
Lsic04G0016300.1 Steroid CYP90D1 low borderline
Lsic04G0016460.1 Steroid CYP90D1 low borderline
Lsic05G0005560.1 Steroid CYP90D1 low borderline
Lsic05G0010630.1 Steroid CYP90D1 low borderline
Lsic05G0010650.1 Steroid CYP90D1 low borderline
Lsic06G0009380.1 Steroid CYP90D1 low borderline
Lsic06G0012570.1 Steroid CYP90D1 medium borderline
Lsic06G0014210.1 Steroid CYP90D1 low borderline
Lsic07G0002050.1 Steroid CYP90D1 medium borderline
Lsic07G0005640.1 Steroid CYP90D1 medium borderline
Lsic07G0013880.1 Steroid CYP90D1 medium borderline
Lsic08G0013780.1 Steroid CYP90D1 medium borderline
Lsic09G0003470.1 Steroid CYP90D1 low borderline
Lsic09G0005890.1 Steroid CYP90D1 low borderline
Lsic09G0011100.1 Steroid CYP90D1 low borderline
Lsic09G0011300.1 Steroid CYP90D1 low borderline