PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Gene Pathway Family Confidence Status
Lsic01G0001570.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0005000.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007120.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007160.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007170.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007200.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007210.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007220.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0009410.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0009440.1 Steroid DWF4/CYP90B1 low borderline
Lsic02G0002970.1 Steroid DWF4/CYP90B1 medium borderline
Lsic02G0004260.1 Steroid DWF4/CYP90B1 low borderline
Lsic02G0004360.1 Steroid DWF4/CYP90B1 low borderline
Lsic02G0016080.1 Steroid DWF4/CYP90B1 medium borderline
Lsic03G0001090.1 Steroid DWF4/CYP90B1 low borderline
Lsic03G0001830.1 Steroid DWF4/CYP90B1 medium borderline
Lsic03G0002430.1 Steroid DWF4/CYP90B1 low borderline
Lsic03G0012760.1 Steroid DWF4/CYP90B1 medium borderline
Lsic03G0012770.1 Steroid DWF4/CYP90B1 medium borderline
Lsic03G0019090.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0003490.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0003500.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0006140.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0006220.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0006230.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0006240.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0006250.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0010010.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0015050.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0015060.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0015100.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016090.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016120.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016170.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016180.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016190.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016200.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016240.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0016450.1 Steroid DWF4/CYP90B1 low borderline
Lsic04G0019570.1 Steroid DWF4/CYP90B1 medium borderline
Lsic04G0023680.1 Steroid DWF4/CYP90B1 low borderline
Lsic05G0000640.1 Steroid DWF4/CYP90B1 medium borderline
Lsic05G0000650.1 Steroid DWF4/CYP90B1 medium borderline
Lsic05G0000680.1 Steroid DWF4/CYP90B1 low borderline
Lsic05G0003830.1 Steroid DWF4/CYP90B1 low borderline
Lsic05G0010640.1 Steroid DWF4/CYP90B1 low borderline
Lsic05G0012190.1 Steroid DWF4/CYP90B1 low borderline
Lsic05G0019140.1 Steroid DWF4/CYP90B1 medium borderline
Lsic05G0019780.1 Steroid DWF4/CYP90B1 low borderline
Lsic05G0019840.1 Steroid DWF4/CYP90B1 low borderline