PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Lsic02G0020300.1 Alkaloid 16OMT medium borderline
Lsic03G0012700.1 Alkaloid 16OMT medium borderline
Lsic05G0019020.1 Alkaloid 16OMT low borderline
Lsic07G0003220.1 Alkaloid 16OMT medium borderline
Lsic07G0014530.1 Alkaloid 16OMT medium borderline
Lsic07G0014540.1 Alkaloid 16OMT medium borderline
Lsic07G0014550.1 Alkaloid 16OMT medium borderline
Lsic10G0000860.1 Alkaloid 16OMT medium borderline
Lsic10G0008780.1 Alkaloid 16OMT medium borderline
Lsic11G0012310.1 Alkaloid 16OMT medium borderline
Lsic11G0012330.1 Alkaloid 16OMT medium borderline
Lsic11G0012340.1 Alkaloid 16OMT medium borderline
Lsic11G0012360.1 Alkaloid 16OMT medium borderline
Lsic11G0012390.1 Alkaloid 16OMT medium borderline
Lsic11G0012400.1 Alkaloid 16OMT medium borderline
Lsic11G0014030.1 Alkaloid 16OMT medium borderline
Lsic11G0014040.1 Alkaloid 16OMT medium borderline
Lsic11G0014060.1 Alkaloid 16OMT medium borderline
Lsic11G0014070.1 Alkaloid 16OMT medium borderline
Lsic11G0014080.1 Alkaloid 16OMT medium borderline
Lsic11G0014090.1 Alkaloid 16OMT medium borderline
Lsic11G0014100.1 Alkaloid 16OMT medium borderline
Lsic11G0014120.1 Alkaloid 16OMT medium borderline
Lsic11G0014130.1 Alkaloid 16OMT medium borderline
Lsic11G0014140.1 Alkaloid 16OMT medium borderline
Lsic02G0029580.1 Alkaloid 6OMT_4OMT_SOMT low borderline
Lsic11G0012350.1 Alkaloid 6OMT_4OMT_SOMT medium pass
Lsic11G0012370.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Lsic11G0012380.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Lsic11G0014050.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Lsic11G0014110.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Lsic01G0007030.1 Alkaloid 7DLGT high pass
Lsic01G0007780.1 Alkaloid 7DLGT high pass
Lsic01G0008180.1 Alkaloid 7DLGT low borderline
Lsic01G0008190.1 Alkaloid 7DLGT low borderline
Lsic01G0008200.1 Alkaloid 7DLGT low borderline
Lsic01G0012780.1 Alkaloid 7DLGT medium pass
Lsic01G0012790.1 Alkaloid 7DLGT low borderline
Lsic01G0012800.1 Alkaloid 7DLGT low borderline
Lsic01G0014910.1 Alkaloid 7DLGT medium pass
Lsic01G0014920.1 Alkaloid 7DLGT high pass
Lsic01G0014930.1 Alkaloid 7DLGT medium pass
Lsic01G0015000.1 Alkaloid 7DLGT medium pass
Lsic01G0015020.1 Alkaloid 7DLGT high pass
Lsic01G0015030.1 Alkaloid 7DLGT high pass
Lsic01G0017770.1 Alkaloid 7DLGT medium pass
Lsic01G0018380.1 Alkaloid 7DLGT low borderline
Lsic01G0018400.1 Alkaloid 7DLGT low borderline
Lsic01G0018430.1 Alkaloid 7DLGT low borderline
Lsic02G0005390.1 Alkaloid 7DLGT medium pass