PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
Lsic02G0018830.1 Phenylpropanoid COMT low borderline
Lsic02G0020300.1 Phenylpropanoid COMT low borderline
Lsic03G0012700.1 Phenylpropanoid COMT low borderline
Lsic03G0019670.1 Phenylpropanoid COMT medium pass
Lsic05G0009650.1 Phenylpropanoid COMT low borderline
Lsic07G0003220.1 Phenylpropanoid COMT medium pass
Lsic07G0014530.1 Phenylpropanoid COMT medium pass
Lsic07G0014540.1 Phenylpropanoid COMT medium pass
Lsic07G0014550.1 Phenylpropanoid COMT medium pass
Lsic10G0000860.1 Phenylpropanoid COMT medium pass
Lsic10G0008780.1 Phenylpropanoid COMT medium pass
Lsic11G0012310.1 Phenylpropanoid COMT medium pass
Lsic11G0012330.1 Phenylpropanoid COMT medium pass
Lsic11G0012340.1 Phenylpropanoid COMT medium pass
Lsic11G0012350.1 Phenylpropanoid COMT low borderline
Lsic11G0012360.1 Phenylpropanoid COMT medium pass
Lsic11G0012370.1 Phenylpropanoid COMT medium pass
Lsic11G0012380.1 Phenylpropanoid COMT low borderline
Lsic11G0012390.1 Phenylpropanoid COMT medium pass
Lsic11G0012400.1 Phenylpropanoid COMT medium pass
Lsic11G0014030.1 Phenylpropanoid COMT medium pass
Lsic11G0014040.1 Phenylpropanoid COMT medium pass
Lsic11G0014060.1 Phenylpropanoid COMT medium pass
Lsic11G0014070.1 Phenylpropanoid COMT medium pass
Lsic11G0014080.1 Phenylpropanoid COMT low borderline
Lsic11G0014090.1 Phenylpropanoid COMT medium pass
Lsic11G0014100.1 Phenylpropanoid COMT medium pass
Lsic11G0014120.1 Phenylpropanoid COMT medium pass
Lsic11G0014130.1 Phenylpropanoid COMT medium pass
Lsic11G0014140.1 Phenylpropanoid COMT medium pass