PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Lsic00G0002110.1 Alkaloid 7DLH medium borderline
Lsic01G0010710.1 Alkaloid 7DLH medium borderline
Lsic03G0014890.1 Alkaloid 7DLH medium borderline
Lsic03G0014910.1 Alkaloid 7DLH medium borderline
Lsic04G0016470.1 Alkaloid 7DLH medium borderline
Lsic04G0019570.1 Alkaloid 7DLH medium borderline
Lsic04G0019580.1 Alkaloid 7DLH medium borderline
Lsic04G0019600.1 Alkaloid 7DLH medium borderline
Lsic05G0000650.1 Alkaloid 7DLH low borderline
Lsic05G0000680.1 Alkaloid 7DLH low borderline
Lsic05G0003830.1 Alkaloid 7DLH medium borderline
Lsic05G0012180.1 Alkaloid 7DLH medium borderline
Lsic05G0012190.1 Alkaloid 7DLH low borderline
Lsic06G0003160.1 Alkaloid 7DLH medium borderline
Lsic06G0016370.1 Alkaloid 7DLH medium borderline
Lsic07G0012210.1 Alkaloid 7DLH low borderline
Lsic09G0002450.1 Alkaloid 7DLH medium borderline
Lsic09G0015720.1 Alkaloid 7DLH medium borderline