PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Lsic01G0001920.1 Flavonoid ANS/LDOX medium borderline
Lsic01G0001930.1 Flavonoid ANS/LDOX medium pass
Lsic02G0008890.1 Flavonoid ANS/LDOX medium borderline
Lsic03G0011310.1 Flavonoid ANS/LDOX medium borderline
Lsic03G0016100.1 Flavonoid ANS/LDOX medium borderline
Lsic04G0019710.1 Flavonoid ANS/LDOX medium borderline
Lsic05G0006400.1 Flavonoid ANS/LDOX medium borderline
Lsic05G0017100.1 Flavonoid ANS/LDOX low borderline
Lsic05G0017110.1 Flavonoid ANS/LDOX medium borderline
Lsic05G0017140.1 Flavonoid ANS/LDOX medium borderline
Lsic05G0017160.1 Flavonoid ANS/LDOX medium borderline
Lsic05G0017170.1 Flavonoid ANS/LDOX medium borderline
Lsic07G0005210.1 Flavonoid ANS/LDOX low borderline
Lsic07G0008540.1 Flavonoid ANS/LDOX medium borderline
Lsic02G0012060.1 Flavonoid C4H medium borderline
Lsic04G0003490.1 Flavonoid C4H medium borderline
Lsic04G0016010.1 Flavonoid C4H medium borderline
Lsic04G0016260.1 Flavonoid C4H medium borderline
Lsic07G0012200.1 Flavonoid C4H low borderline
Lsic08G0006590.1 Flavonoid C4H medium borderline
Lsic09G0003820.1 Flavonoid C4H low borderline
Lsic10G0014870.1 Flavonoid C4H medium borderline
Lsic02G0016810.1 Flavonoid CHI medium pass
Lsic02G0022900.1 Flavonoid CHI medium pass
Lsic04G0010210.1 Flavonoid CHI medium pass
Lsic04G0013810.1 Flavonoid CHI low borderline
Lsic05G0004330.1 Flavonoid CHS medium pass
Lsic05G0004340.1 Flavonoid CHS medium pass
Lsic05G0004350.1 Flavonoid CHS medium pass
Lsic05G0004370.1 Flavonoid CHS medium pass
Lsic05G0004380.1 Flavonoid CHS medium pass
Lsic05G0021960.1 Flavonoid CHS low borderline
Lsic08G0004720.1 Flavonoid CHS medium pass
Lsic08G0004730.1 Flavonoid CHS medium pass
Lsic08G0004740.1 Flavonoid CHS medium pass
Lsic09G0011580.1 Flavonoid CHS medium pass
Lsic11G0011760.1 Flavonoid CHS medium pass
Lsic00G0002130.1 Flavonoid DFR medium borderline
Lsic03G0012660.1 Flavonoid DFR medium pass
Lsic03G0012670.1 Flavonoid DFR medium borderline
Lsic04G0002580.1 Flavonoid DFR medium borderline
Lsic04G0024250.1 Flavonoid DFR medium borderline
Lsic05G0021070.1 Flavonoid DFR low borderline
Lsic09G0018960.1 Flavonoid DFR medium borderline
Lsic10G0000200.1 Flavonoid DFR medium borderline
Lsic10G0002780.1 Flavonoid DFR medium borderline
Lsic10G0010700.1 Flavonoid DFR medium borderline
Lsic11G0004510.1 Flavonoid DFR low borderline
Lsic01G0005000.1 Flavonoid F3'5'H/CYP75A medium borderline
Lsic01G0005010.1 Flavonoid F3'5'H/CYP75A medium borderline