PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Lsic02G0012060.1 Flavonoid C4H medium borderline
Lsic04G0003490.1 Flavonoid C4H medium borderline
Lsic04G0016010.1 Flavonoid C4H medium borderline
Lsic04G0016260.1 Flavonoid C4H medium borderline
Lsic07G0012200.1 Flavonoid C4H low borderline
Lsic08G0006590.1 Flavonoid C4H medium borderline
Lsic09G0003820.1 Flavonoid C4H low borderline
Lsic10G0014870.1 Flavonoid C4H medium borderline
Lsic00G0001970.1 Rosmarinic Acid C4H low borderline
Lsic00G0002110.1 Rosmarinic Acid C4H low borderline
Lsic01G0001570.1 Rosmarinic Acid C4H low borderline
Lsic01G0004140.1 Rosmarinic Acid C4H low borderline
Lsic01G0005000.1 Rosmarinic Acid C4H low borderline
Lsic01G0005010.1 Rosmarinic Acid C4H low borderline
Lsic01G0006220.1 Rosmarinic Acid C4H low borderline
Lsic01G0006380.1 Rosmarinic Acid C4H low borderline
Lsic01G0007120.1 Rosmarinic Acid C4H low borderline
Lsic01G0007130.1 Rosmarinic Acid C4H low borderline
Lsic01G0007140.1 Rosmarinic Acid C4H low borderline
Lsic01G0007160.1 Rosmarinic Acid C4H low borderline
Lsic01G0007170.1 Rosmarinic Acid C4H low borderline
Lsic01G0007180.1 Rosmarinic Acid C4H low borderline
Lsic01G0007190.1 Rosmarinic Acid C4H low borderline
Lsic01G0007200.1 Rosmarinic Acid C4H medium pass
Lsic01G0007210.1 Rosmarinic Acid C4H medium pass
Lsic01G0007220.1 Rosmarinic Acid C4H medium pass
Lsic01G0009410.1 Rosmarinic Acid C4H low borderline
Lsic01G0009420.1 Rosmarinic Acid C4H medium pass
Lsic01G0009430.1 Rosmarinic Acid C4H low borderline
Lsic01G0009440.1 Rosmarinic Acid C4H low borderline
Lsic01G0010730.1 Rosmarinic Acid C4H low borderline
Lsic01G0010740.1 Rosmarinic Acid C4H low borderline
Lsic01G0018910.1 Rosmarinic Acid C4H medium pass
Lsic02G0001310.1 Rosmarinic Acid C4H low borderline
Lsic02G0004260.1 Rosmarinic Acid C4H medium pass
Lsic02G0004270.1 Rosmarinic Acid C4H low borderline
Lsic02G0004280.1 Rosmarinic Acid C4H low borderline
Lsic02G0004300.1 Rosmarinic Acid C4H low borderline
Lsic02G0004310.1 Rosmarinic Acid C4H medium pass
Lsic02G0004320.1 Rosmarinic Acid C4H low borderline
Lsic02G0004330.1 Rosmarinic Acid C4H low borderline
Lsic02G0004340.1 Rosmarinic Acid C4H medium pass
Lsic02G0004350.1 Rosmarinic Acid C4H low borderline
Lsic02G0004360.1 Rosmarinic Acid C4H low borderline
Lsic02G0004370.1 Rosmarinic Acid C4H low borderline
Lsic02G0004390.1 Rosmarinic Acid C4H low borderline
Lsic02G0004400.1 Rosmarinic Acid C4H medium pass
Lsic02G0004420.1 Rosmarinic Acid C4H medium pass
Lsic02G0012060.1 Rosmarinic Acid C4H medium pass
Lsic02G0013430.1 Rosmarinic Acid C4H low borderline