PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Lsic04G0016180.1 Rosmarinic Acid C4H low borderline
Lsic04G0016190.1 Rosmarinic Acid C4H low borderline
Lsic04G0016200.1 Rosmarinic Acid C4H medium pass
Lsic04G0016210.1 Rosmarinic Acid C4H low borderline
Lsic04G0016220.1 Rosmarinic Acid C4H medium pass
Lsic04G0016230.1 Rosmarinic Acid C4H low borderline
Lsic04G0016240.1 Rosmarinic Acid C4H medium pass
Lsic04G0016250.1 Rosmarinic Acid C4H low borderline
Lsic04G0016260.1 Rosmarinic Acid C4H low borderline
Lsic04G0016270.1 Rosmarinic Acid C4H low borderline
Lsic04G0016290.1 Rosmarinic Acid C4H low borderline
Lsic04G0016300.1 Rosmarinic Acid C4H low borderline
Lsic04G0016450.1 Rosmarinic Acid C4H low borderline
Lsic04G0016460.1 Rosmarinic Acid C4H low borderline
Lsic04G0016470.1 Rosmarinic Acid C4H low borderline
Lsic04G0019570.1 Rosmarinic Acid C4H low borderline
Lsic04G0019580.1 Rosmarinic Acid C4H low borderline
Lsic04G0019600.1 Rosmarinic Acid C4H low borderline
Lsic04G0019610.1 Rosmarinic Acid C4H low borderline
Lsic04G0023680.1 Rosmarinic Acid C4H low borderline
Lsic05G0000630.1 Rosmarinic Acid C4H low borderline
Lsic05G0000640.1 Rosmarinic Acid C4H low borderline
Lsic05G0000660.1 Rosmarinic Acid C4H low borderline
Lsic05G0003830.1 Rosmarinic Acid C4H low borderline
Lsic05G0005560.1 Rosmarinic Acid C4H low borderline
Lsic05G0007430.1 Rosmarinic Acid C4H low borderline
Lsic05G0008060.1 Rosmarinic Acid C4H low borderline
Lsic05G0010630.1 Rosmarinic Acid C4H medium pass
Lsic05G0010640.1 Rosmarinic Acid C4H low borderline
Lsic05G0010650.1 Rosmarinic Acid C4H medium pass
Lsic05G0019140.1 Rosmarinic Acid C4H low borderline
Lsic05G0019840.1 Rosmarinic Acid C4H low borderline
Lsic05G0021280.1 Rosmarinic Acid C4H low borderline
Lsic06G0003160.1 Rosmarinic Acid C4H low borderline
Lsic06G0005580.1 Rosmarinic Acid C4H low borderline
Lsic06G0005590.1 Rosmarinic Acid C4H low borderline
Lsic06G0005600.1 Rosmarinic Acid C4H low borderline
Lsic06G0005630.1 Rosmarinic Acid C4H low borderline
Lsic06G0005640.1 Rosmarinic Acid C4H low borderline
Lsic06G0005650.1 Rosmarinic Acid C4H low borderline
Lsic06G0005660.1 Rosmarinic Acid C4H low borderline
Lsic06G0005670.1 Rosmarinic Acid C4H low borderline
Lsic06G0006510.1 Rosmarinic Acid C4H low borderline
Lsic06G0009380.1 Rosmarinic Acid C4H low borderline
Lsic06G0012570.1 Rosmarinic Acid C4H low borderline
Lsic06G0014210.1 Rosmarinic Acid C4H low borderline
Lsic06G0015910.1 Rosmarinic Acid C4H medium pass
Lsic07G0002050.1 Rosmarinic Acid C4H low borderline
Lsic07G0002250.1 Rosmarinic Acid C4H medium pass
Lsic07G0006240.1 Rosmarinic Acid C4H low borderline