PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
Lsic07G0006240.1 Terpenoid CYP76 medium borderline
Lsic07G0006250.1 Terpenoid CYP76 medium borderline
Lsic07G0006680.1 Terpenoid CYP76 medium borderline
Lsic08G0006590.1 Terpenoid CYP76 medium pass
Lsic08G0009030.1 Terpenoid CYP76 medium borderline
Lsic08G0015090.1 Terpenoid CYP76 medium pass
Lsic09G0000550.1 Terpenoid CYP76 low borderline
Lsic09G0003390.1 Terpenoid CYP76 medium borderline
Lsic09G0003460.1 Terpenoid CYP76 medium pass
Lsic09G0003470.1 Terpenoid CYP76 medium borderline
Lsic09G0003480.1 Terpenoid CYP76 medium pass
Lsic09G0003490.1 Terpenoid CYP76 medium pass
Lsic09G0003500.1 Terpenoid CYP76 medium borderline
Lsic09G0003510.1 Terpenoid CYP76 medium pass
Lsic09G0003520.1 Terpenoid CYP76 medium pass
Lsic09G0003810.1 Terpenoid CYP76 medium pass
Lsic09G0003820.1 Terpenoid CYP76 medium pass
Lsic09G0003830.1 Terpenoid CYP76 medium borderline
Lsic09G0003840.1 Terpenoid CYP76 medium pass
Lsic09G0003850.1 Terpenoid CYP76 medium pass
Lsic09G0004660.1 Terpenoid CYP76 low borderline
Lsic09G0005820.1 Terpenoid CYP76 medium borderline
Lsic09G0005830.1 Terpenoid CYP76 medium borderline
Lsic09G0005880.1 Terpenoid CYP76 medium borderline
Lsic09G0005890.1 Terpenoid CYP76 medium borderline
Lsic09G0015720.1 Terpenoid CYP76 low borderline
Lsic09G0016570.1 Terpenoid CYP76 medium pass
Lsic09G0017850.1 Terpenoid CYP76 medium pass
Lsic09G0017870.1 Terpenoid CYP76 medium pass
Lsic09G0017880.1 Terpenoid CYP76 medium pass
Lsic10G0001640.1 Terpenoid CYP76 medium pass
Lsic10G0001650.1 Terpenoid CYP76 medium pass
Lsic10G0001660.1 Terpenoid CYP76 low borderline
Lsic10G0001680.1 Terpenoid CYP76 medium pass
Lsic10G0001690.1 Terpenoid CYP76 low borderline
Lsic10G0001700.1 Terpenoid CYP76 medium pass
Lsic10G0001720.1 Terpenoid CYP76 medium borderline
Lsic10G0001770.1 Terpenoid CYP76 medium borderline
Lsic10G0002200.1 Terpenoid CYP76 low borderline
Lsic10G0002460.1 Terpenoid CYP76 medium pass
Lsic10G0002470.1 Terpenoid CYP76 medium pass
Lsic10G0002480.1 Terpenoid CYP76 low borderline
Lsic10G0002500.1 Terpenoid CYP76 low borderline
Lsic10G0002510.1 Terpenoid CYP76 medium borderline
Lsic10G0002520.1 Terpenoid CYP76 medium pass
Lsic10G0004220.1 Terpenoid CYP76 low borderline
Lsic10G0006810.1 Terpenoid CYP76 medium borderline
Lsic10G0014870.1 Terpenoid CYP76 medium pass
Lsic11G0000820.1 Terpenoid CYP76 medium borderline
Lsic11G0000900.1 Terpenoid CYP76 medium borderline