PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Lsic00G0001970.1 Alkaloid T3O medium borderline
Lsic01G0005000.1 Alkaloid T3O medium borderline
Lsic01G0006380.1 Alkaloid T3O medium pass
Lsic01G0007160.1 Alkaloid T3O medium borderline
Lsic01G0007190.1 Alkaloid T3O medium borderline
Lsic01G0007200.1 Alkaloid T3O medium borderline
Lsic01G0007210.1 Alkaloid T3O medium borderline
Lsic01G0007220.1 Alkaloid T3O medium borderline
Lsic01G0009410.1 Alkaloid T3O medium borderline
Lsic01G0009420.1 Alkaloid T3O medium borderline
Lsic01G0010620.1 Alkaloid T3O low borderline
Lsic01G0010630.1 Alkaloid T3O low borderline
Lsic01G0010650.1 Alkaloid T3O medium pass
Lsic01G0010680.1 Alkaloid T3O low borderline
Lsic01G0010690.1 Alkaloid T3O low borderline
Lsic01G0010700.1 Alkaloid T3O low borderline
Lsic01G0010730.1 Alkaloid T3O medium pass
Lsic01G0010740.1 Alkaloid T3O medium pass
Lsic01G0018910.1 Alkaloid T3O medium borderline
Lsic02G0001310.1 Alkaloid T3O medium borderline
Lsic02G0004260.1 Alkaloid T3O medium borderline
Lsic02G0004270.1 Alkaloid T3O medium borderline
Lsic02G0004280.1 Alkaloid T3O medium borderline
Lsic02G0004300.1 Alkaloid T3O medium borderline
Lsic02G0004310.1 Alkaloid T3O medium borderline
Lsic02G0004390.1 Alkaloid T3O medium borderline
Lsic02G0004400.1 Alkaloid T3O medium borderline
Lsic02G0004420.1 Alkaloid T3O medium borderline
Lsic02G0012980.1 Alkaloid T3O low borderline
Lsic02G0013430.1 Alkaloid T3O low borderline
Lsic02G0016080.1 Alkaloid T3O low borderline
Lsic02G0020570.1 Alkaloid T3O low borderline
Lsic02G0025340.1 Alkaloid T3O low borderline
Lsic02G0029440.1 Alkaloid T3O medium pass
Lsic03G0001090.1 Alkaloid T3O medium pass
Lsic03G0001830.1 Alkaloid T3O medium pass
Lsic03G0004920.1 Alkaloid T3O medium pass
Lsic03G0012190.1 Alkaloid T3O medium borderline
Lsic03G0016270.1 Alkaloid T3O medium borderline
Lsic03G0016280.1 Alkaloid T3O medium borderline
Lsic03G0016320.1 Alkaloid T3O low borderline
Lsic03G0017130.1 Alkaloid T3O medium borderline
Lsic03G0019090.1 Alkaloid T3O low borderline
Lsic04G0006130.1 Alkaloid T3O medium borderline
Lsic04G0006140.1 Alkaloid T3O medium borderline
Lsic04G0006170.1 Alkaloid T3O medium borderline
Lsic04G0006180.1 Alkaloid T3O medium borderline
Lsic04G0006200.1 Alkaloid T3O medium borderline
Lsic04G0006240.1 Alkaloid T3O medium borderline
Lsic04G0006250.1 Alkaloid T3O medium borderline