PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
Lsic03G0008290.1 Flavonoid UFGT low borderline
Lsic03G0008330.1 Flavonoid UFGT high pass
Lsic03G0008360.1 Flavonoid UFGT medium pass
Lsic03G0008370.1 Flavonoid UFGT medium pass
Lsic03G0008380.1 Flavonoid UFGT medium pass
Lsic03G0008410.1 Flavonoid UFGT low borderline
Lsic03G0008420.1 Flavonoid UFGT medium pass
Lsic03G0008430.1 Flavonoid UFGT medium pass
Lsic03G0008460.1 Flavonoid UFGT medium pass
Lsic03G0008830.1 Flavonoid UFGT high pass
Lsic03G0019720.1 Flavonoid UFGT medium pass
Lsic03G0019730.1 Flavonoid UFGT high pass
Lsic03G0019740.1 Flavonoid UFGT medium pass
Lsic03G0019750.1 Flavonoid UFGT medium pass
Lsic03G0019760.1 Flavonoid UFGT high pass
Lsic03G0019770.1 Flavonoid UFGT high pass
Lsic03G0019780.1 Flavonoid UFGT high pass
Lsic03G0019790.1 Flavonoid UFGT high pass
Lsic04G0001340.1 Flavonoid UFGT medium pass
Lsic04G0001350.1 Flavonoid UFGT medium pass
Lsic04G0001360.1 Flavonoid UFGT medium pass
Lsic04G0003350.1 Flavonoid UFGT medium pass
Lsic04G0003360.1 Flavonoid UFGT medium pass
Lsic04G0003390.1 Flavonoid UFGT medium pass
Lsic04G0003790.1 Flavonoid UFGT medium pass
Lsic04G0009310.1 Flavonoid UFGT medium pass
Lsic04G0009330.1 Flavonoid UFGT medium pass
Lsic04G0009400.1 Flavonoid UFGT medium pass
Lsic04G0009410.1 Flavonoid UFGT medium pass
Lsic04G0019190.1 Flavonoid UFGT high pass
Lsic04G0019280.1 Flavonoid UFGT high pass
Lsic04G0019290.1 Flavonoid UFGT medium pass
Lsic04G0019300.1 Flavonoid UFGT medium pass
Lsic04G0019330.1 Flavonoid UFGT medium pass
Lsic04G0019340.1 Flavonoid UFGT medium pass
Lsic04G0019350.1 Flavonoid UFGT high pass
Lsic04G0019370.1 Flavonoid UFGT high pass
Lsic04G0019380.1 Flavonoid UFGT low borderline
Lsic04G0019430.1 Flavonoid UFGT medium pass
Lsic04G0022010.1 Flavonoid UFGT medium pass
Lsic04G0022400.1 Flavonoid UFGT medium pass
Lsic04G0022870.1 Flavonoid UFGT high pass
Lsic05G0001340.1 Flavonoid UFGT medium pass
Lsic05G0002280.1 Flavonoid UFGT medium pass
Lsic05G0007890.1 Flavonoid UFGT low borderline
Lsic05G0007900.1 Flavonoid UFGT medium pass
Lsic05G0011460.1 Flavonoid UFGT medium pass
Lsic05G0011470.1 Flavonoid UFGT medium pass
Lsic05G0013580.1 Flavonoid UFGT high pass
Lsic05G0020550.1 Flavonoid UFGT low borderline