PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Gene Pathway Family Confidence Status
Lsic00G0000790.1 Phenylpropanoid 4CL medium pass
Lsic01G0000800.1 Phenylpropanoid 4CL low borderline
Lsic01G0005400.1 Phenylpropanoid 4CL medium pass
Lsic02G0004840.1 Phenylpropanoid 4CL low borderline
Lsic02G0026350.1 Phenylpropanoid 4CL medium pass
Lsic02G0026360.1 Phenylpropanoid 4CL medium pass
Lsic02G0026370.1 Phenylpropanoid 4CL medium pass
Lsic03G0000100.1 Phenylpropanoid 4CL medium pass
Lsic03G0011290.1 Phenylpropanoid 4CL low borderline
Lsic03G0012450.1 Phenylpropanoid 4CL medium pass
Lsic03G0020060.1 Phenylpropanoid 4CL medium pass
Lsic04G0001120.1 Phenylpropanoid 4CL medium pass
Lsic04G0006900.1 Phenylpropanoid 4CL medium pass
Lsic04G0017920.1 Phenylpropanoid 4CL low borderline
Lsic04G0017990.1 Phenylpropanoid 4CL medium pass
Lsic04G0018000.1 Phenylpropanoid 4CL medium pass
Lsic05G0004210.1 Phenylpropanoid 4CL low borderline
Lsic05G0006780.1 Phenylpropanoid 4CL low borderline
Lsic05G0014350.1 Phenylpropanoid 4CL low borderline
Lsic05G0015810.1 Phenylpropanoid 4CL medium pass
Lsic06G0011330.1 Phenylpropanoid 4CL medium pass
Lsic07G0007170.1 Phenylpropanoid 4CL low borderline
Lsic07G0010690.1 Phenylpropanoid 4CL medium pass
Lsic09G0001760.1 Phenylpropanoid 4CL low borderline
Lsic09G0002720.1 Phenylpropanoid 4CL medium pass
Lsic09G0004650.1 Phenylpropanoid 4CL medium pass
Lsic09G0008420.1 Phenylpropanoid 4CL medium pass
Lsic09G0008810.1 Phenylpropanoid 4CL medium pass
Lsic09G0008820.1 Phenylpropanoid 4CL medium pass
Lsic09G0008870.1 Phenylpropanoid 4CL medium pass
Lsic09G0008880.1 Phenylpropanoid 4CL medium pass
Lsic09G0008890.1 Phenylpropanoid 4CL medium pass
Lsic09G0016140.1 Phenylpropanoid 4CL low borderline
Lsic10G0002320.1 Phenylpropanoid 4CL medium pass
Lsic10G0003310.1 Phenylpropanoid 4CL low borderline
Lsic11G0007230.1 Phenylpropanoid 4CL medium pass
Lsic11G0013370.1 Phenylpropanoid 4CL low borderline
Lsic00G0001970.1 Phenylpropanoid C3'H/CYP98A medium borderline
Lsic00G0002110.1 Phenylpropanoid C3'H/CYP98A low borderline
Lsic01G0001570.1 Phenylpropanoid C3'H/CYP98A low borderline
Lsic01G0004140.1 Phenylpropanoid C3'H/CYP98A low borderline
Lsic01G0005000.1 Phenylpropanoid C3'H/CYP98A medium borderline
Lsic01G0005010.1 Phenylpropanoid C3'H/CYP98A low borderline
Lsic01G0006380.1 Phenylpropanoid C3'H/CYP98A low borderline
Lsic01G0007120.1 Phenylpropanoid C3'H/CYP98A medium borderline
Lsic01G0007160.1 Phenylpropanoid C3'H/CYP98A medium borderline
Lsic01G0007180.1 Phenylpropanoid C3'H/CYP98A medium borderline
Lsic01G0007190.1 Phenylpropanoid C3'H/CYP98A medium borderline
Lsic01G0007200.1 Phenylpropanoid C3'H/CYP98A medium borderline
Lsic01G0007210.1 Phenylpropanoid C3'H/CYP98A medium borderline