PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Lsic01G0003560.1 Terpenoid AACT low borderline
Lsic02G0011650.1 Terpenoid AACT medium borderline
Lsic05G0011030.1 Terpenoid AACT medium borderline
Lsic09G0011590.1 Terpenoid AACT medium borderline
Lsic10G0015580.1 Terpenoid AACT low borderline
Lsic11G0013400.1 Terpenoid AACT medium borderline
Lsic00G0000100.1 Terpenoid BAHD medium pass
Lsic01G0002630.1 Terpenoid BAHD low borderline
Lsic01G0005520.1 Terpenoid BAHD medium pass
Lsic01G0015310.1 Terpenoid BAHD medium pass
Lsic01G0016750.1 Terpenoid BAHD medium pass
Lsic01G0017230.1 Terpenoid BAHD medium pass
Lsic01G0019800.1 Terpenoid BAHD medium pass
Lsic02G0002980.1 Terpenoid BAHD medium pass
Lsic02G0003000.1 Terpenoid BAHD medium pass
Lsic02G0004770.1 Terpenoid BAHD medium pass
Lsic02G0007180.1 Terpenoid BAHD medium pass
Lsic02G0010470.1 Terpenoid BAHD medium pass
Lsic02G0013770.1 Terpenoid BAHD medium pass
Lsic02G0014620.1 Terpenoid BAHD low borderline
Lsic02G0018700.1 Terpenoid BAHD medium pass
Lsic02G0018710.1 Terpenoid BAHD medium pass
Lsic02G0018720.1 Terpenoid BAHD medium pass
Lsic02G0018730.1 Terpenoid BAHD medium pass
Lsic02G0018740.1 Terpenoid BAHD medium pass
Lsic02G0020010.1 Terpenoid BAHD low borderline
Lsic02G0021040.1 Terpenoid BAHD medium pass
Lsic02G0021900.1 Terpenoid BAHD low borderline
Lsic02G0024920.1 Terpenoid BAHD medium pass
Lsic02G0025360.1 Terpenoid BAHD medium pass
Lsic02G0025410.1 Terpenoid BAHD low borderline
Lsic02G0026580.1 Terpenoid BAHD medium pass
Lsic02G0026590.1 Terpenoid BAHD medium pass
Lsic02G0026600.1 Terpenoid BAHD medium pass
Lsic02G0026610.1 Terpenoid BAHD medium pass
Lsic02G0029120.1 Terpenoid BAHD medium pass
Lsic03G0000130.1 Terpenoid BAHD low borderline
Lsic03G0000820.1 Terpenoid BAHD low borderline
Lsic03G0001720.1 Terpenoid BAHD medium pass
Lsic03G0003210.1 Terpenoid BAHD medium pass
Lsic03G0003220.1 Terpenoid BAHD medium pass
Lsic03G0003230.1 Terpenoid BAHD medium pass
Lsic03G0005030.1 Terpenoid BAHD medium pass
Lsic03G0006470.1 Terpenoid BAHD medium pass
Lsic03G0010430.1 Terpenoid BAHD medium pass
Lsic03G0010460.1 Terpenoid BAHD low borderline
Lsic03G0010480.1 Terpenoid BAHD medium pass
Lsic03G0011590.1 Terpenoid BAHD medium pass
Lsic03G0011770.1 Terpenoid BAHD low borderline
Lsic03G0011780.1 Terpenoid BAHD low borderline