PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic05G0005130.1 Alkaloid STR low borderline
Lsic05G0007040.1 Alkaloid STR low borderline
Lsic05G0007060.1 Alkaloid STR medium pass
Lsic05G0011790.1 Alkaloid STR low borderline
Lsic05G0013390.1 Alkaloid STR medium pass
Lsic05G0013400.1 Alkaloid STR medium pass
Lsic05G0016820.1 Alkaloid STR low borderline
Lsic06G0009110.1 Alkaloid STR low borderline
Lsic06G0012590.1 Alkaloid STR medium pass
Lsic07G0004890.1 Alkaloid STR low borderline
Lsic07G0005220.1 Alkaloid STR low borderline
Lsic07G0007790.1 Alkaloid STR medium pass
Lsic07G0008700.1 Alkaloid STR low borderline
Lsic08G0007110.1 Alkaloid STR low borderline
Lsic08G0008810.1 Alkaloid STR low borderline
Lsic08G0011600.1 Alkaloid STR low borderline
Lsic09G0005700.1 Alkaloid STR low borderline
Lsic09G0007870.1 Alkaloid STR medium pass
Lsic10G0002410.1 Alkaloid STR low borderline
Lsic10G0007450.1 Alkaloid STR low borderline
Lsic10G0010710.1 Alkaloid STR low borderline
Lsic10G0010920.1 Alkaloid STR low borderline
Lsic10G0011850.1 Alkaloid STR low borderline
Lsic10G0014330.1 Alkaloid STR low borderline
Lsic11G0000040.1 Alkaloid STR low borderline
Lsic11G0002840.1 Alkaloid STR low borderline
Lsic01G0001570.1 Alkaloid T16H medium borderline
Lsic01G0006220.1 Alkaloid T16H medium borderline
Lsic01G0007120.1 Alkaloid T16H medium borderline
Lsic01G0007170.1 Alkaloid T16H medium borderline
Lsic02G0004330.1 Alkaloid T16H medium borderline
Lsic02G0004360.1 Alkaloid T16H medium borderline
Lsic02G0004370.1 Alkaloid T16H medium borderline
Lsic02G0012060.1 Alkaloid T16H medium borderline
Lsic03G0012180.1 Alkaloid T16H medium borderline
Lsic03G0012760.1 Alkaloid T16H low borderline
Lsic04G0006160.1 Alkaloid T16H medium borderline
Lsic04G0006190.1 Alkaloid T16H medium borderline
Lsic04G0006210.1 Alkaloid T16H medium borderline
Lsic04G0006220.1 Alkaloid T16H medium borderline
Lsic04G0006230.1 Alkaloid T16H medium borderline
Lsic04G0015060.1 Alkaloid T16H medium borderline
Lsic04G0016100.1 Alkaloid T16H medium borderline
Lsic04G0016170.1 Alkaloid T16H medium borderline
Lsic04G0016190.1 Alkaloid T16H low borderline
Lsic04G0016210.1 Alkaloid T16H low borderline
Lsic04G0016230.1 Alkaloid T16H medium borderline
Lsic08G0014730.1 Alkaloid T16H medium borderline
Lsic09G0003830.1 Alkaloid T16H medium borderline
Lsic10G0001660.1 Alkaloid T16H medium borderline