PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic09G0011300.1 Alkaloid T3O medium pass
Lsic09G0017800.1 Alkaloid T3O medium pass
Lsic09G0018690.1 Alkaloid T3O low borderline
Lsic10G0001680.1 Alkaloid T3O medium borderline
Lsic10G0001720.1 Alkaloid T3O medium borderline
Lsic10G0006810.1 Alkaloid T3O medium borderline
Lsic11G0000820.1 Alkaloid T3O medium borderline
Lsic11G0000900.1 Alkaloid T3O medium borderline
Lsic11G0009850.1 Alkaloid T3O low borderline
Lsic11G0011330.1 Alkaloid T3O medium borderline
Lsic11G0016440.1 Alkaloid T3O low borderline
Lsic08G0005490.1 Alkaloid TDC low borderline
Lsic00G0000650.1 Alkaloid TRI/TRII medium pass
Lsic00G0000670.1 Alkaloid TRI/TRII medium pass
Lsic01G0011970.1 Alkaloid TRI/TRII medium pass
Lsic01G0016620.1 Alkaloid TRI/TRII medium pass
Lsic02G0002960.1 Alkaloid TRI/TRII medium pass
Lsic02G0010870.1 Alkaloid TRI/TRII medium pass
Lsic02G0013350.1 Alkaloid TRI/TRII medium pass
Lsic02G0025080.1 Alkaloid TRI/TRII medium pass
Lsic02G0025090.1 Alkaloid TRI/TRII low borderline
Lsic02G0025100.1 Alkaloid TRI/TRII medium pass
Lsic03G0018560.1 Alkaloid TRI/TRII medium pass
Lsic03G0018570.1 Alkaloid TRI/TRII medium pass
Lsic03G0018580.1 Alkaloid TRI/TRII medium pass
Lsic03G0018590.1 Alkaloid TRI/TRII low borderline
Lsic03G0021350.1 Alkaloid TRI/TRII low borderline
Lsic03G0022590.1 Alkaloid TRI/TRII medium pass
Lsic04G0009070.1 Alkaloid TRI/TRII medium pass
Lsic05G0002050.1 Alkaloid TRI/TRII low borderline
Lsic05G0004500.1 Alkaloid TRI/TRII medium pass
Lsic05G0004510.1 Alkaloid TRI/TRII medium pass
Lsic05G0013150.1 Alkaloid TRI/TRII low borderline
Lsic06G0001340.1 Alkaloid TRI/TRII low borderline
Lsic06G0001350.1 Alkaloid TRI/TRII low borderline
Lsic06G0008720.1 Alkaloid TRI/TRII low borderline
Lsic08G0006270.1 Alkaloid TRI/TRII low borderline
Lsic08G0016090.1 Alkaloid TRI/TRII low borderline
Lsic09G0005530.1 Alkaloid TRI/TRII medium pass
Lsic09G0008130.1 Alkaloid TRI/TRII medium pass
Lsic11G0016030.1 Alkaloid TRI/TRII medium pass
Lsic02G0009240.1 Alkaloid TYDC_DDC medium borderline
Lsic02G0009250.1 Alkaloid TYDC_DDC medium borderline
Lsic05G0010570.1 Alkaloid TYDC_DDC medium borderline
Lsic02G0018800.1 Alkaloid XMT_MXMT_DXMT medium borderline
Lsic11G0005500.1 Alkaloid XMT_MXMT_DXMT low borderline
Lsic00G0000790.1 Flavonoid 4CL medium pass
Lsic01G0000800.1 Flavonoid 4CL low borderline
Lsic01G0005400.1 Flavonoid 4CL medium pass
Lsic02G0004840.1 Flavonoid 4CL low borderline