PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsic10G0002640.1 Terpenoid BAHD medium pass
Lsic10G0002650.1 Terpenoid BAHD medium pass
Lsic10G0008200.1 Terpenoid BAHD medium pass
Lsic10G0008460.1 Terpenoid BAHD medium pass
Lsic10G0008590.1 Terpenoid BAHD medium pass
Lsic10G0012050.1 Terpenoid BAHD medium pass
Lsic11G0000620.1 Terpenoid BAHD medium pass
Lsic11G0001800.1 Terpenoid BAHD medium pass
Lsic11G0003620.1 Terpenoid BAHD medium pass
Lsic11G0006970.1 Terpenoid BAHD medium pass
Lsic11G0009290.1 Terpenoid BAHD medium pass
Lsic11G0009360.1 Terpenoid BAHD medium pass
Lsic11G0009370.1 Terpenoid BAHD medium pass
Lsic11G0010660.1 Terpenoid BAHD medium pass
Lsic11G0011140.1 Terpenoid BAHD medium pass
Lsic11G0012750.1 Terpenoid BAHD medium pass
Lsic11G0016340.1 Terpenoid BAHD medium pass
Lsic11G0016950.1 Terpenoid BAHD low borderline
Lsic05G0017480.1 Terpenoid CMK/IspE low borderline
Lsic06G0004190.1 Terpenoid CMK/IspE high pass
Lsic01G0007120.1 Terpenoid CYP71 medium borderline
Lsic01G0008960.1 Terpenoid CYP71 low borderline
Lsic02G0004280.1 Terpenoid CYP71 medium borderline
Lsic02G0004340.1 Terpenoid CYP71 medium borderline
Lsic02G0004360.1 Terpenoid CYP71 medium borderline
Lsic02G0004370.1 Terpenoid CYP71 medium borderline
Lsic02G0004420.1 Terpenoid CYP71 medium borderline
Lsic03G0001050.1 Terpenoid CYP71 medium pass
Lsic03G0018720.1 Terpenoid CYP71 medium pass
Lsic04G0006130.1 Terpenoid CYP71 medium borderline
Lsic04G0006140.1 Terpenoid CYP71 medium borderline
Lsic04G0006170.1 Terpenoid CYP71 medium borderline
Lsic04G0006180.1 Terpenoid CYP71 medium borderline
Lsic04G0006200.1 Terpenoid CYP71 medium borderline
Lsic04G0006230.1 Terpenoid CYP71 medium borderline
Lsic04G0006240.1 Terpenoid CYP71 medium borderline
Lsic04G0009770.1 Terpenoid CYP71 medium pass
Lsic04G0014120.1 Terpenoid CYP71 low borderline
Lsic05G0019740.1 Terpenoid CYP71 low borderline
Lsic06G0007960.1 Terpenoid CYP71 low borderline
Lsic06G0015910.1 Terpenoid CYP71 medium borderline
Lsic09G0007670.1 Terpenoid CYP71 medium pass
Lsic09G0017470.1 Terpenoid CYP71 low borderline
Lsic10G0003100.1 Terpenoid CYP71 low borderline
Lsic10G0004830.1 Terpenoid CYP71 medium pass
Lsic10G0014350.1 Terpenoid CYP71 medium pass
Lsic11G0010250.1 Terpenoid CYP71 low borderline
Lsic11G0011820.1 Terpenoid CYP71 medium pass
Lsic00G0001970.1 Terpenoid CYP76 medium pass
Lsic01G0001570.1 Terpenoid CYP76 low borderline