PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic09G0017850.1 Steroid DWF4/CYP90B1 low borderline
Lsic09G0017880.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0001650.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0001680.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0001690.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0002460.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0002470.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0002480.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0002500.1 Steroid DWF4/CYP90B1 low borderline
Lsic10G0002520.1 Steroid DWF4/CYP90B1 low borderline
Lsic11G0000820.1 Steroid DWF4/CYP90B1 medium borderline
Lsic11G0009850.1 Steroid DWF4/CYP90B1 low borderline
Lsic02G0028350.1 Steroid DWF5 low borderline
Lsic07G0001570.1 Steroid DWF5 low borderline
Lsic07G0006850.1 Steroid DWF7 medium pass
Lsic03G0019430.1 Steroid FK high pass
Lsic07G0004030.1 Steroid HYD1 high pass
Lsic09G0010370.1 Steroid HYD1 low borderline
Lsic01G0006540.1 Steroid ROT3/CYP90C1 low borderline
Lsic05G0000620.1 Steroid ROT3/CYP90C1 low borderline
Lsic05G0000630.1 Steroid ROT3/CYP90C1 medium borderline
Lsic05G0000660.1 Steroid ROT3/CYP90C1 medium borderline
Lsic06G0006510.1 Steroid ROT3/CYP90C1 medium borderline
Lsic07G0012220.1 Steroid ROT3/CYP90C1 medium borderline
Lsic09G0003390.1 Steroid ROT3/CYP90C1 medium borderline
Lsic11G0002960.1 Steroid ROT3/CYP90C1 medium borderline
Lsic02G0013320.1 Steroid SMO1/SMO2 medium pass
Lsic07G0013500.1 Steroid SMO1/SMO2 medium pass
Lsic07G0013510.1 Steroid SMO1/SMO2 medium pass
Lsic02G0002320.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic02G0007180.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic02G0020010.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic02G0021900.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic02G0022660.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic02G0025360.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic02G0025410.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic03G0000130.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic03G0000820.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic03G0011770.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic03G0011780.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic03G0011980.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic03G0011990.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic04G0000570.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic04G0002540.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic04G0007400.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic04G0011600.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic04G0014680.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic04G0014690.1 Steroid SMT1/SMT2/SMT3 low borderline
Lsic04G0014700.1 Steroid SMT1/SMT2/SMT3 medium pass
Lsic04G0014710.1 Steroid SMT1/SMT2/SMT3 medium pass