PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic08G0006680.1 Terpenoid BAHD low borderline
Lsic08G0006950.1 Terpenoid BAHD low borderline
Lsic08G0007070.1 Terpenoid BAHD medium pass
Lsic08G0013440.1 Terpenoid BAHD medium pass
Lsic08G0013730.1 Terpenoid BAHD medium pass
Lsic08G0014120.1 Terpenoid BAHD medium pass
Lsic08G0014200.1 Terpenoid BAHD medium pass
Lsic08G0016170.1 Terpenoid BAHD medium pass
Lsic08G0016180.1 Terpenoid BAHD medium pass
Lsic08G0016190.1 Terpenoid BAHD medium pass
Lsic09G0003750.1 Terpenoid BAHD medium pass
Lsic09G0011230.1 Terpenoid BAHD low borderline
Lsic09G0015710.1 Terpenoid BAHD medium pass
Lsic09G0017810.1 Terpenoid BAHD medium pass
Lsic10G0001950.1 Terpenoid BAHD medium pass
Lsic10G0001960.1 Terpenoid BAHD medium pass
Lsic10G0001970.1 Terpenoid BAHD medium pass
Lsic10G0001980.1 Terpenoid BAHD medium pass
Lsic10G0001990.1 Terpenoid BAHD medium pass
Lsic10G0002000.1 Terpenoid BAHD low borderline
Lsic10G0002010.1 Terpenoid BAHD medium pass
Lsic10G0002020.1 Terpenoid BAHD medium pass
Lsic10G0002030.1 Terpenoid BAHD medium pass
Lsic10G0002040.1 Terpenoid BAHD medium pass
Lsic10G0002050.1 Terpenoid BAHD medium pass
Lsic10G0002630.1 Terpenoid BAHD medium pass
Lsic10G0002640.1 Terpenoid BAHD medium pass
Lsic10G0002650.1 Terpenoid BAHD medium pass
Lsic10G0008200.1 Terpenoid BAHD medium pass
Lsic10G0008460.1 Terpenoid BAHD medium pass
Lsic10G0008590.1 Terpenoid BAHD medium pass
Lsic10G0012050.1 Terpenoid BAHD medium pass
Lsic11G0000620.1 Terpenoid BAHD medium pass
Lsic11G0001800.1 Terpenoid BAHD medium pass
Lsic11G0003620.1 Terpenoid BAHD medium pass
Lsic11G0006970.1 Terpenoid BAHD medium pass
Lsic11G0009290.1 Terpenoid BAHD medium pass
Lsic11G0009360.1 Terpenoid BAHD medium pass
Lsic11G0009370.1 Terpenoid BAHD medium pass
Lsic11G0010660.1 Terpenoid BAHD medium pass
Lsic11G0011140.1 Terpenoid BAHD medium pass
Lsic11G0012750.1 Terpenoid BAHD medium pass
Lsic11G0016340.1 Terpenoid BAHD medium pass
Lsic11G0016950.1 Terpenoid BAHD low borderline
Lsic05G0017480.1 Terpenoid CMK/IspE low borderline
Lsic06G0004190.1 Terpenoid CMK/IspE high pass
Lsic01G0007120.1 Terpenoid CYP71 medium borderline
Lsic01G0008960.1 Terpenoid CYP71 low borderline
Lsic02G0004280.1 Terpenoid CYP71 medium borderline
Lsic02G0004340.1 Terpenoid CYP71 medium borderline