PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsic08G0003320.1 Flavonoid F3H medium borderline
Lsic08G0004100.1 Flavonoid F3H medium borderline
Lsic08G0004870.1 Flavonoid F3H medium borderline
Lsic08G0011550.1 Flavonoid F3H medium borderline
Lsic08G0011560.1 Flavonoid F3H medium borderline
Lsic09G0001220.1 Flavonoid F3H medium borderline
Lsic09G0005620.1 Flavonoid F3H medium borderline
Lsic09G0012460.1 Flavonoid F3H low borderline
Lsic09G0015640.1 Flavonoid F3H low borderline
Lsic09G0019170.1 Flavonoid F3H medium borderline
Lsic10G0015700.1 Flavonoid F3H medium borderline
Lsic11G0001940.1 Flavonoid F3H medium borderline
Lsic11G0002320.1 Flavonoid F3H low borderline
Lsic11G0002330.1 Flavonoid F3H low borderline
Lsic11G0008220.1 Flavonoid F3H medium borderline
Lsic11G0010350.1 Flavonoid F3H medium borderline
Lsic11G0010360.1 Flavonoid F3H medium borderline
Lsic11G0010370.1 Flavonoid F3H medium borderline
Lsic11G0010380.1 Flavonoid F3H medium borderline
Lsic11G0010400.1 Flavonoid F3H low borderline
Lsic11G0016700.1 Flavonoid F3H medium borderline
Lsic03G0000270.1 Flavonoid FLS low borderline
Lsic05G0006390.1 Flavonoid FLS low borderline
Lsic05G0017150.1 Flavonoid FLS medium borderline
Lsic01G0006220.1 Flavonoid FNS medium borderline
Lsic01G0009410.1 Flavonoid FNS medium borderline
Lsic01G0010640.1 Flavonoid FNS low borderline
Lsic02G0004320.1 Flavonoid FNS medium borderline
Lsic02G0004340.1 Flavonoid FNS medium borderline
Lsic02G0025960.1 Flavonoid FNS medium borderline
Lsic02G0029240.1 Flavonoid FNS low borderline
Lsic03G0012180.1 Flavonoid FNS medium borderline
Lsic03G0012200.1 Flavonoid FNS medium borderline
Lsic04G0014190.1 Flavonoid FNS medium borderline
Lsic04G0016210.1 Flavonoid FNS medium borderline
Lsic05G0019840.1 Flavonoid FNS medium borderline
Lsic05G0021220.1 Flavonoid FNS low borderline
Lsic07G0003900.1 Flavonoid FNS medium borderline
Lsic10G0001640.1 Flavonoid FNS medium borderline
Lsic10G0001650.1 Flavonoid FNS medium borderline
Lsic10G0001660.1 Flavonoid FNS medium borderline
Lsic10G0001690.1 Flavonoid FNS medium borderline
Lsic10G0001710.1 Flavonoid FNS medium borderline
Lsic10G0002460.1 Flavonoid FNS medium borderline
Lsic10G0002740.1 Flavonoid FNS medium borderline
Lsic00G0000110.1 Flavonoid IFR low borderline
Lsic00G0000830.1 Flavonoid IFR high pass
Lsic00G0000840.1 Flavonoid IFR high pass
Lsic00G0000850.1 Flavonoid IFR high pass
Lsic01G0001600.1 Flavonoid IFR low borderline