PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic02G0004270.1 Terpenoid CYP76 low borderline
Lsic02G0004300.1 Terpenoid CYP76 medium borderline
Lsic02G0004310.1 Terpenoid CYP76 medium borderline
Lsic02G0004320.1 Terpenoid CYP76 low borderline
Lsic02G0004330.1 Terpenoid CYP76 medium borderline
Lsic02G0004350.1 Terpenoid CYP76 medium pass
Lsic02G0004390.1 Terpenoid CYP76 medium borderline
Lsic02G0004400.1 Terpenoid CYP76 medium borderline
Lsic02G0012060.1 Terpenoid CYP76 medium pass
Lsic02G0016080.1 Terpenoid CYP76 low borderline
Lsic02G0025950.1 Terpenoid CYP76 medium borderline
Lsic02G0025960.1 Terpenoid CYP76 low borderline
Lsic03G0002430.1 Terpenoid CYP76 low borderline
Lsic03G0011260.1 Terpenoid CYP76 low borderline
Lsic03G0012180.1 Terpenoid CYP76 low borderline
Lsic03G0012190.1 Terpenoid CYP76 medium borderline
Lsic03G0016270.1 Terpenoid CYP76 medium borderline
Lsic03G0016280.1 Terpenoid CYP76 medium borderline
Lsic03G0017130.1 Terpenoid CYP76 medium borderline
Lsic03G0017140.1 Terpenoid CYP76 medium pass
Lsic03G0019480.1 Terpenoid CYP76 medium pass
Lsic04G0001330.1 Terpenoid CYP76 medium pass
Lsic04G0006150.1 Terpenoid CYP76 medium pass
Lsic04G0006160.1 Terpenoid CYP76 medium borderline
Lsic04G0006190.1 Terpenoid CYP76 medium borderline
Lsic04G0006210.1 Terpenoid CYP76 medium borderline
Lsic04G0006220.1 Terpenoid CYP76 medium borderline
Lsic04G0006250.1 Terpenoid CYP76 medium borderline
Lsic04G0006790.1 Terpenoid CYP76 medium pass
Lsic04G0012100.1 Terpenoid CYP76 low borderline
Lsic04G0014190.1 Terpenoid CYP76 low borderline
Lsic04G0015050.1 Terpenoid CYP76 low borderline
Lsic04G0015060.1 Terpenoid CYP76 medium pass
Lsic04G0015100.1 Terpenoid CYP76 medium pass
Lsic04G0015110.1 Terpenoid CYP76 medium pass
Lsic04G0016080.1 Terpenoid CYP76 low borderline
Lsic04G0016090.1 Terpenoid CYP76 low borderline
Lsic04G0016100.1 Terpenoid CYP76 low borderline
Lsic04G0016120.1 Terpenoid CYP76 medium borderline
Lsic04G0016150.1 Terpenoid CYP76 medium pass
Lsic04G0016160.1 Terpenoid CYP76 medium pass
Lsic04G0016170.1 Terpenoid CYP76 low borderline
Lsic04G0016180.1 Terpenoid CYP76 medium pass
Lsic04G0016190.1 Terpenoid CYP76 low borderline
Lsic04G0016200.1 Terpenoid CYP76 medium pass
Lsic04G0016220.1 Terpenoid CYP76 medium pass
Lsic04G0016230.1 Terpenoid CYP76 medium pass
Lsic04G0016240.1 Terpenoid CYP76 medium pass
Lsic04G0016250.1 Terpenoid CYP76 low borderline
Lsic04G0016260.1 Terpenoid CYP76 low borderline