PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsic05G0000650.1 Flavonoid IFS low borderline
Lsic05G0000660.1 Flavonoid IFS low borderline
Lsic05G0007430.1 Flavonoid IFS low borderline
Lsic05G0010630.1 Flavonoid IFS medium borderline
Lsic05G0010640.1 Flavonoid IFS medium borderline
Lsic05G0012190.1 Flavonoid IFS low borderline
Lsic05G0019140.1 Flavonoid IFS low borderline
Lsic05G0019780.1 Flavonoid IFS low borderline
Lsic06G0005590.1 Flavonoid IFS medium borderline
Lsic06G0006510.1 Flavonoid IFS low borderline
Lsic06G0009380.1 Flavonoid IFS low borderline
Lsic06G0012570.1 Flavonoid IFS low borderline
Lsic06G0015910.1 Flavonoid IFS medium borderline
Lsic06G0016370.1 Flavonoid IFS low borderline
Lsic07G0002050.1 Flavonoid IFS low borderline
Lsic07G0005640.1 Flavonoid IFS low borderline
Lsic07G0006240.1 Flavonoid IFS medium borderline
Lsic07G0006250.1 Flavonoid IFS medium borderline
Lsic07G0006680.1 Flavonoid IFS medium borderline
Lsic07G0007760.1 Flavonoid IFS low borderline
Lsic07G0012210.1 Flavonoid IFS low borderline
Lsic07G0012220.1 Flavonoid IFS low borderline
Lsic07G0013880.1 Flavonoid IFS low borderline
Lsic07G0014740.1 Flavonoid IFS low borderline
Lsic08G0013780.1 Flavonoid IFS low borderline
Lsic08G0014260.1 Flavonoid IFS low borderline
Lsic08G0014730.1 Flavonoid IFS low borderline
Lsic08G0015090.1 Flavonoid IFS medium borderline
Lsic09G0002450.1 Flavonoid IFS low borderline
Lsic09G0003500.1 Flavonoid IFS medium borderline
Lsic09G0003850.1 Flavonoid IFS medium borderline
Lsic09G0004660.1 Flavonoid IFS low borderline
Lsic09G0005820.1 Flavonoid IFS low borderline
Lsic09G0005830.1 Flavonoid IFS medium borderline
Lsic09G0015330.1 Flavonoid IFS low borderline
Lsic09G0015720.1 Flavonoid IFS low borderline
Lsic09G0017800.1 Flavonoid IFS low borderline
Lsic09G0018690.1 Flavonoid IFS low borderline
Lsic10G0001680.1 Flavonoid IFS medium borderline
Lsic10G0001850.1 Flavonoid IFS low borderline
Lsic10G0002200.1 Flavonoid IFS low borderline
Lsic10G0002480.1 Flavonoid IFS low borderline
Lsic10G0002510.1 Flavonoid IFS medium borderline
Lsic11G0000900.1 Flavonoid IFS medium borderline
Lsic11G0009850.1 Flavonoid IFS low borderline
Lsic11G0011330.1 Flavonoid IFS medium borderline
Lsic11G0016440.1 Flavonoid IFS low borderline
Lsic01G0013260.1 Flavonoid PAL high pass
Lsic01G0013280.1 Flavonoid PAL high pass
Lsic01G0013290.1 Flavonoid PAL high pass