PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2406
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
LusiC83571610001400.1 Phenylpropanoid CAD medium pass
LusiC83798310002200.1 Phenylpropanoid CAD low borderline
Lusiscaffold11230017960.1 Phenylpropanoid CAD medium borderline
Lusiscaffold11250018890.1 Phenylpropanoid CAD medium pass
Lusiscaffold11340019040.1 Phenylpropanoid CAD low borderline
Lusiscaffold11430022190.1 Phenylpropanoid CAD medium pass
Lusiscaffold1170026750.1 Phenylpropanoid CAD medium pass
Lusiscaffold1200030910.1 Phenylpropanoid CAD medium borderline
Lusiscaffold1200030930.1 Phenylpropanoid CAD medium borderline
Lusiscaffold1210031910.1 Phenylpropanoid CAD medium pass
Lusiscaffold1210031930.1 Phenylpropanoid CAD low borderline
Lusiscaffold1230039560.1 Phenylpropanoid CAD medium borderline
Lusiscaffold12470041770.1 Phenylpropanoid CAD medium pass
Lusiscaffold13080046100.1 Phenylpropanoid CAD low borderline
Lusiscaffold13080046110.1 Phenylpropanoid CAD low borderline
Lusiscaffold13130048720.1 Phenylpropanoid CAD low borderline
Lusiscaffold13310052040.1 Phenylpropanoid CAD low borderline
Lusiscaffold1410059160.1 Phenylpropanoid CAD medium borderline
Lusiscaffold14910064490.1 Phenylpropanoid CAD medium pass
Lusiscaffold150066830.1 Phenylpropanoid CAD medium borderline
Lusiscaffold150067130.1 Phenylpropanoid CAD low borderline
Lusiscaffold150068010.1 Phenylpropanoid CAD low borderline
Lusiscaffold16030085570.1 Phenylpropanoid CAD low borderline
Lusiscaffold16030085580.1 Phenylpropanoid CAD low borderline
Lusiscaffold16030085590.1 Phenylpropanoid CAD medium pass
Lusiscaffold1630087240.1 Phenylpropanoid CAD low borderline
Lusiscaffold16350088730.1 Phenylpropanoid CAD medium borderline
Lusiscaffold16350088740.1 Phenylpropanoid CAD medium borderline
Lusiscaffold17210095700.1 Phenylpropanoid CAD medium pass
Lusiscaffold1790100790.1 Phenylpropanoid CAD medium borderline
Lusiscaffold1790100800.1 Phenylpropanoid CAD medium borderline
Lusiscaffold19490107800.1 Phenylpropanoid CAD low borderline
Lusiscaffold2000114830.1 Phenylpropanoid CAD medium borderline
Lusiscaffold2040117140.1 Phenylpropanoid CAD medium borderline
Lusiscaffold2040117150.1 Phenylpropanoid CAD low borderline
Lusiscaffold2170125920.1 Phenylpropanoid CAD medium borderline
Lusiscaffold2170125930.1 Phenylpropanoid CAD medium borderline
Lusiscaffold230134560.1 Phenylpropanoid CAD medium borderline
Lusiscaffold2490141940.1 Phenylpropanoid CAD low borderline
Lusiscaffold2510147980.1 Phenylpropanoid CAD low borderline
Lusiscaffold2510148000.1 Phenylpropanoid CAD low borderline
Lusiscaffold2750165780.1 Phenylpropanoid CAD medium borderline
Lusiscaffold280168750.1 Phenylpropanoid CAD low borderline
Lusiscaffold280168760.1 Phenylpropanoid CAD low borderline
Lusiscaffold280172060.1 Phenylpropanoid CAD medium pass
Lusiscaffold2880179930.1 Phenylpropanoid CAD low borderline
Lusiscaffold2950188560.1 Phenylpropanoid CAD low borderline
Lusiscaffold3100203330.1 Phenylpropanoid CAD low borderline
Lusiscaffold3100203360.1 Phenylpropanoid CAD low borderline
Lusiscaffold3190210960.1 Phenylpropanoid CAD medium borderline