PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2406
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP51G1
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Gene Pathway Family Confidence Status
Lusiscaffold10360007620.1 Steroid CYP51G1 medium borderline
Lusiscaffold11340019240.1 Steroid CYP51G1 medium borderline
Lusiscaffold1270044690.1 Steroid CYP51G1 medium borderline
Lusiscaffold16300088190.1 Steroid CYP51G1 low borderline
Lusiscaffold1630087070.1 Steroid CYP51G1 medium borderline
Lusiscaffold2000114310.1 Steroid CYP51G1 medium borderline
Lusiscaffold2090120830.1 Steroid CYP51G1 low borderline
Lusiscaffold2250131450.1 Steroid CYP51G1 medium borderline
Lusiscaffold2250131710.1 Steroid CYP51G1 medium borderline
Lusiscaffold250145760.1 Steroid CYP51G1 medium borderline
Lusiscaffold2610153080.1 Steroid CYP51G1 medium borderline
Lusiscaffold2720158910.1 Steroid CYP51G1 medium borderline
Lusiscaffold2720161910.1 Steroid CYP51G1 medium borderline
Lusiscaffold280168280.1 Steroid CYP51G1 medium borderline
Lusiscaffold2910181970.1 Steroid CYP51G1 medium borderline
Lusiscaffold3100204040.1 Steroid CYP51G1 medium borderline
Lusiscaffold3630241410.1 Steroid CYP51G1 medium borderline
Lusiscaffold4130257710.1 Steroid CYP51G1 medium borderline
Lusiscaffold5050306760.1 Steroid CYP51G1 low borderline
Lusiscaffold5400315670.1 Steroid CYP51G1 medium borderline
Lusiscaffold60332210.1 Steroid CYP51G1 medium borderline
Lusiscaffold60332220.1 Steroid CYP51G1 medium borderline
Lusiscaffold7090364270.1 Steroid CYP51G1 medium borderline
Lusiscaffold7310367710.1 Steroid CYP51G1 medium borderline
Lusiscaffold7430370340.1 Steroid CYP51G1 medium borderline
Lusiscaffold7440371220.1 Steroid CYP51G1 medium borderline
Lusiscaffold860395570.1 Steroid CYP51G1 medium borderline
Lusiscaffold9060415070.1 Steroid CYP51G1 medium borderline
Lusiscaffold960426210.1 Steroid CYP51G1 medium borderline
Lusiscaffold960426230.1 Steroid CYP51G1 medium borderline