PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2406
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Lusiscaffold1200031120.1 Rosmarinic Acid RAS medium pass
Lusiscaffold12470041960.1 Rosmarinic Acid RAS low borderline
Lusiscaffold14910064240.1 Rosmarinic Acid RAS low borderline
Lusiscaffold15190072710.1 Rosmarinic Acid RAS low borderline
Lusiscaffold160083800.1 Rosmarinic Acid RAS medium pass
Lusiscaffold180101540.1 Rosmarinic Acid RAS medium pass
Lusiscaffold2120122840.1 Rosmarinic Acid RAS medium pass
Lusiscaffold21510123460.1 Rosmarinic Acid RAS medium pass
Lusiscaffold2280132510.1 Rosmarinic Acid RAS medium pass
Lusiscaffold2280132530.1 Rosmarinic Acid RAS medium pass
Lusiscaffold2750164740.1 Rosmarinic Acid RAS low borderline
Lusiscaffold280168540.1 Rosmarinic Acid RAS medium pass
Lusiscaffold290180700.1 Rosmarinic Acid RAS low borderline
Lusiscaffold300191490.1 Rosmarinic Acid RAS medium pass
Lusiscaffold300191500.1 Rosmarinic Acid RAS medium pass
Lusiscaffold3060198270.1 Rosmarinic Acid RAS medium pass
Lusiscaffold3190209850.1 Rosmarinic Acid RAS low borderline
Lusiscaffold3190211230.1 Rosmarinic Acid RAS medium pass
Lusiscaffold3190211490.1 Rosmarinic Acid RAS medium pass
Lusiscaffold3420227060.1 Rosmarinic Acid RAS medium pass
Lusiscaffold4060256570.1 Rosmarinic Acid RAS low borderline
Lusiscaffold4130258380.1 Rosmarinic Acid RAS low borderline
Lusiscaffold4160260840.1 Rosmarinic Acid RAS low borderline
Lusiscaffold420265630.1 Rosmarinic Acid RAS medium pass
Lusiscaffold420265640.1 Rosmarinic Acid RAS medium pass
Lusiscaffold430271620.1 Rosmarinic Acid RAS medium pass
Lusiscaffold430271630.1 Rosmarinic Acid RAS medium pass
Lusiscaffold460280470.1 Rosmarinic Acid RAS low borderline
Lusiscaffold4620284560.1 Rosmarinic Acid RAS medium pass
Lusiscaffold500304090.1 Rosmarinic Acid RAS low borderline
Lusiscaffold5050306380.1 Rosmarinic Acid RAS low borderline
Lusiscaffold5400316240.1 Rosmarinic Acid RAS medium pass
Lusiscaffold6050333850.1 Rosmarinic Acid RAS low borderline
Lusiscaffold6120337100.1 Rosmarinic Acid RAS medium pass
Lusiscaffold6120337110.1 Rosmarinic Acid RAS medium pass
Lusiscaffold6120337120.1 Rosmarinic Acid RAS medium pass
Lusiscaffold760374230.1 Rosmarinic Acid RAS low borderline
Lusiscaffold8470393800.1 Rosmarinic Acid RAS medium pass
Lusiscaffold8470393810.1 Rosmarinic Acid RAS medium pass
Lusiscaffold8980408820.1 Rosmarinic Acid RAS low borderline
Lusiscaffold90411060.1 Rosmarinic Acid RAS low borderline
Lusiscaffold9110417000.1 Rosmarinic Acid RAS medium pass
Lusiscaffold9150418160.1 Rosmarinic Acid RAS low borderline
Lusiscaffold9240422090.1 Rosmarinic Acid RAS low borderline
Lusiscaffold9240422140.1 Rosmarinic Acid RAS low borderline