PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold14210059240.1 Flavonoid UFGT medium pass
Lusiscaffold14210059250.1 Flavonoid UFGT high pass
Lusiscaffold14210059260.1 Flavonoid UFGT high pass
Lusiscaffold14210059270.1 Flavonoid UFGT high pass
Lusiscaffold1450060260.1 Flavonoid UFGT medium pass
Lusiscaffold1450060280.1 Flavonoid UFGT low borderline
Lusiscaffold14860063430.1 Flavonoid UFGT medium pass
Lusiscaffold14860063440.1 Flavonoid UFGT medium pass
Lusiscaffold14910064460.1 Flavonoid UFGT high pass
Lusiscaffold14910064470.1 Flavonoid UFGT medium pass
Lusiscaffold14910064690.1 Flavonoid UFGT high pass
Lusiscaffold14910064700.1 Flavonoid UFGT medium pass
Lusiscaffold14910064710.1 Flavonoid UFGT medium pass
Lusiscaffold14910064730.1 Flavonoid UFGT medium pass
Lusiscaffold150066760.1 Flavonoid UFGT high pass
Lusiscaffold1560077640.1 Flavonoid UFGT high pass
Lusiscaffold1560078220.1 Flavonoid UFGT high pass
Lusiscaffold1560079560.1 Flavonoid UFGT medium pass
Lusiscaffold1570081760.1 Flavonoid UFGT high pass
Lusiscaffold1590083090.1 Flavonoid UFGT medium pass
Lusiscaffold16710092230.1 Flavonoid UFGT low borderline
Lusiscaffold16710092250.1 Flavonoid UFGT high pass
Lusiscaffold1760097530.1 Flavonoid UFGT medium pass
Lusiscaffold1760097540.1 Flavonoid UFGT medium pass
Lusiscaffold1760097550.1 Flavonoid UFGT medium pass
Lusiscaffold1760097560.1 Flavonoid UFGT high pass
Lusiscaffold1760097890.1 Flavonoid UFGT high pass
Lusiscaffold1770098820.1 Flavonoid UFGT medium pass
Lusiscaffold1770098830.1 Flavonoid UFGT high pass
Lusiscaffold1770099280.1 Flavonoid UFGT medium pass
Lusiscaffold1820102440.1 Flavonoid UFGT high pass
Lusiscaffold1840104260.1 Flavonoid UFGT medium pass
Lusiscaffold20112940.1 Flavonoid UFGT medium pass
Lusiscaffold2060119100.1 Flavonoid UFGT high pass
Lusiscaffold2250130880.1 Flavonoid UFGT medium pass
Lusiscaffold2250130890.1 Flavonoid UFGT medium pass
Lusiscaffold2250130900.1 Flavonoid UFGT high pass
Lusiscaffold2300135810.1 Flavonoid UFGT high pass
Lusiscaffold230133730.1 Flavonoid UFGT high pass
Lusiscaffold2310136050.1 Flavonoid UFGT medium pass
Lusiscaffold250147130.1 Flavonoid UFGT high pass
Lusiscaffold2540149680.1 Flavonoid UFGT high pass
Lusiscaffold2540149710.1 Flavonoid UFGT medium pass
Lusiscaffold2550149910.1 Flavonoid UFGT medium pass
Lusiscaffold2550149920.1 Flavonoid UFGT medium pass
Lusiscaffold2590151620.1 Flavonoid UFGT medium pass
Lusiscaffold25930151900.1 Flavonoid UFGT high pass
Lusiscaffold2610154520.1 Flavonoid UFGT high pass
Lusiscaffold2690156120.1 Flavonoid UFGT medium pass
Lusiscaffold2720160930.1 Flavonoid UFGT medium pass